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An automated approach for microplastics analysis using focal plane array (FPA) FTIR microscopy and image analysis

机译:使用焦平面阵列(FPA)FTIR显微镜和图像分析的微型微型分析自动化方法

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摘要

The analysis of imaging data derived from micro- Fourier transform infrared (mFTIR) microscopy is a powerful tool allowing the analysis of microplastics enriched on membrane filters. In this study we present an automated approach to reduce the time demand currently needed for data analyses. We developed a novel analysis pipeline, based on the OPUS c Software by Bruker, followed by image analysis with Python and Simple ITK image processing modules. By using this newly developed pipeline it was possible to analyse datasets from focal plane array (FPA) mFTIR mapping of samples containing up to 1.8 million single spectra. All spectra were compared against a database of different synthetic and natural polymers by various routines followed by benchmark tests with focus on accuracy and quality. The spectral correlation was optimized for high quality data generation, which allowed image analysis. Based on these results an image analysis approach was developed, providing information on particle numbers and sizes for each polymer detected. It was possible to collect all data with relative ease even for complex sample matrices. This approach significantly decreases the time demand for the interpretation of complex FTIR-imaging data and significantly increases the data quality.
机译:源自微傅里叶变换红外(MFTIR)显微镜的成像数据的分析是一种强大的工具,允许富含膜过滤器的微塑料的分析。在这项研究中,我们提出了一种自动化方法来减少目前数据分析所需的时间需求。我们开发了一种基于Bruker的Opus C软件的新型分析管道,然后用Python和简单的ITK图像处理模块进行图像分析。通过使用这种新开发的流水线,可以从焦平面阵列(FPA)MFTIR映射分析包含高达180万单光谱的样本的数据集。将所有光谱与各种常规的不同合成和天然聚合物的数据库进行比较,然后通过专注于准确性和质量的基准测试。允许图像分析优化了光谱相关性以获得高质量的数据生成。基于这些结果,开发了一种图像分析方法,提供有关检测到的每种聚合物的粒子数和尺寸的信息。即使对于复杂的样本矩阵,也可以通过相对容易地收集所有数据。这种方法显着降低了对复杂的FTIR成像数据解释的时间需求,并显着提高了数据质量。

著录项

  • 来源
    《Analytical methods》 |2017年第9期|共13页
  • 作者单位

    Alfred Wegener Inst Helmholtz Ctr Polar &

    Marine Res Biol Anstalt Helgoland Kurpromenade 201 D-27498 Helgoland Germany;

    Alfred Wegener Inst Helmholtz Ctr Polar &

    Marine Res Biol Anstalt Helgoland Kurpromenade 201 D-27498 Helgoland Germany;

    Hsch Bremerhaven Studiengang Med Tech Karlstadt 8 D-27568 Bremerhaven Germany;

    Alfred Wegener Inst Helmholtz Ctr Polar &

    Marine Res Biol Anstalt Helgoland Kurpromenade 201 D-27498 Helgoland Germany;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 分析化学;
  • 关键词

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