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Introducing Membrane Transport Energy into the Design of Sustainable Chemicals against Cytotoxicity

机译:将膜运输能量引入可持续化学品免受细胞毒性的设计

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Adverse outcomes associated with chemical use and spill have raised concerns over its sustainability. The traditional toxicity testing, using laboratory animals as the downstream safety check, is becoming less viable due to the economical and ethical liabilities. Green chemistry proposed an alternative strategy to attain chemical sustainability: designing chemicals to maximize their intrinsic sustainability and thus minimize their hazardous risk. Following decades of progress, there is still a need to develop new metrics to quantify the level of chemical sustainability. In this report, we developed a new double functional tool capable of estimating the sustainability probability of a chemical and designing new chemicals to meet a desired sustainability probability. This tool was built upon the Naive Bayesian algorithm with the design variables stemming from three sources. Molecular softness and polarizability were derived from density functional theory (DFT), and membrane transport free energy was computed using our in-house developed finite element algorithm. Model validation against the cytotoxicity measured in the U.S. EPA Toxicity ForeCaster (ToxCast) database (tested up to 100 mu M) yielded a score of 0.82 for the area under the curve (AUC) of the receiver operating characteristic (ROC). On the basis of this model, we constructed the assessment tool with the dual capabilities of prediction and design.
机译:与化学用途和溢出相关的不利结果提出了对其可持续性的担忧。传统的毒性测试,使用实验室动物作为下游安全检查,由于经济和道德负债导致不太可行。绿色化学提出了一种替代战略,以获得化学可持续性:设计化学品以最大限度地提高其内在可持续性,从而最大限度地减少其危险风险。在几十年的进步之后,仍然需要开发新的指标,以量化化学可持续性水平。在本报告中,我们开发了一种新的双功能工具,能够估计化学品和设计新化学品的可持续性概率,以满足所需的可持续性概率。该工具建立在朴素贝叶斯算法之上,具有从三个来源的设计变量。分子柔和度和极化性来自密度泛函理论(DFT),并且使用我们内部开发的有限元算法计算膜输送自由能。针对在美国EPA毒性预测(TOXCAST)数据库中测量的细胞毒性的模型验证(最多100亩)在接收器操作特征(ROC)的曲线(AUC)下的区域产生0.82的得分。在此模型的基础上,我们通过预测和设计的双重能力构建了评估工具。

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