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Multidimensional and fuzzy sample entropy (SampEn(MF)) for quantifying H&E histological images of colorectal cancer

机译:用于量化高分性癌症的H&E组织学图像的多维和模糊样品熵(Sampen(MF))

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摘要

In this study, we propose to use a method based on the combination of sample entropy with multiscale and multidimensional approaches, along with a fuzzy function. The model was applied to quantify and classify H&E histological images of colorectal cancer. The multiscale approach was defined by analysing windows of different sizes and variations in tolerance for determining pattern similarity. The multidimensional strategy was performed by considering each pixel in the colour image as an n-dimensional vector, which was analysed from the Minkowski distance. The fuzzy strategy was a Gaussian function used to verify the pertinence of the distances between windows. The result was a method capable of computing similarities between pixels contained in windows of various sizes, as well as the information present in the colour channels. The power of quantification was tested in a public colorectal image dataset, which was composed of both benign and malignant classes. The results were given as inputs for classifiers of different categories and analysed by applying the k-fold cross-validation and holdout methods. The derived performances indicate that the proposed association was capable of distinguishing the benign and malignant groups, with values that surpassed those results obtained with important techniques available in the Literature. The best performance was an AUC value of 0.983, an important result, mainly when we consider the difficulties of clinical practice for the diagnosis of the colorectal cancer.
机译:在本研究中,我们建议使用基于样品熵的组合的方法,具有多尺度和多维方法以及模糊功能。该模型用于量化和分类结直肠癌的H&E组织学图像。通过分析不同尺寸的窗口和用于确定模式相似度的公差的变化来定义多尺度方法。通过将彩色图像中的每个像素视为N维向量来执行多维策略,从Minkowski距离分析。模糊策略是一个高斯函数,用于验证窗口之间的距离的结构。结果是一种能够计算各种尺寸的窗口中包含的像素之间的相似性,以及存在于颜色信道中的信息。在公共结肠直肠图像数据集中测试量化的功率,该数据集由良性和恶性等级组成。将结果作为不同类别的分类器的输入,并通过应用K折叠交叉验证和阻止方法进行分析。衍生的性能表明,所提出的关联能够区分良性和恶性群体,其值超过了文献中可用的重要技术获得的值。最佳性能是AUC值为0.983,这是一个重要的结果,主要是当我们考虑诊断结直肠癌的临床实践困难时。

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