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Integrating an individual-based model with approximate Bayesian computation to predict the invasion of a freshwater fish provides insights into dispersal and range expansion dynamics

机译:与近似贝叶斯计算集成基于个性的模型,以预测淡水鱼的入侵提供分散和范围扩展动态的见解

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摘要

Short-distance dispersal enables introduced alien species to colonise and invade local habitats following their initial introduction, but is often poorly understood for many freshwater taxa. Knowledge gaps in range expansion of alien species can be overcome using predictive approaches such as individual based models (IBMs), especially if predictions can be improved through fitting to empirical data, but this can be challenging for models having multiple parameters. We therefore estimated the parameters of a model implemented in the RangeShifter IBM platform by approximate Bayesian computation (ABC) in order to predict the further invasion of a lowland river (Great Ouse, England) by a small-bodied invasive fish (bitterling Rhodeus sericeus). Prior estimates for parameters were obtained from the literature and expert opinion. Model fitting was conducted using a time-series (1983 to 2018) of sampling data at fixed locations and revealed that for 5 of 11 model parameters, the posterior distributions differed markedly from prior assumptions. In particular, sub-adult maximum emigration probability was substantially higher in the posteriors than priors. Simulations of bitterling range expansion predicted that following detection in 1984, their early expansion involved a relatively high population growth rate that stabilised after 5 years. The pattern of bitterling patch occupancy was sigmoidal, with 20% of the catchment occupied after 20 years, increasing to 80% after 30 years. Predictions were then for 95% occupancy after 69 years. The development of this IBM thus successfully simulated the range expansion dynamics of this small-bodied invasive fish, with ABC improving the simulation precision. This combined methodology also highlighted that sub-adult dispersal was more likely to contribute to the rapid colonisation rate than expert opinion suggested. These results emphasise the importance of time-series data for refining IBM parameters generally and increasing our understanding of dispersal behaviour and range expansion dynamics specifically.
机译:短途分散使得在其最初的介绍之后,可以引入殖民化和侵入当地栖息地的外来物种,但对于许多淡水分类征而言,往往是较差的。知识间隙范围扩展外来物种的扩展可以使用基于个人的模型(IBMS)等预测方法来克服,特别是如果通过拟合到经验数据可以改善预测,但这可能对具有多个参数的模型来具有挑战性。因此,我们估计通过近似贝叶斯计算(ABC)在Rangeshifter IBM平台中实现的模型的参数,以预测由一条小型侵入性鱼(Bitterling Rhodeus Sericeus)的低地河流(伟大的雄河,英国)进一步入侵。从文献和专家意见获得参数的先前估计。使用时间序列(1983到2018)进行模型拟合在固定位置的采样数据进行,并显示出5种11个模型参数,后部分布从先前的假设显着不同。特别地,子成体的最大移位概率在后部的前载体比前叉基本上高于。苦限范围扩张的模拟预测,在1984年的检测后,他们的早期扩增涉及5年后稳定的较高的人口增长率。苦珍贴片占用的模式是僵硬的,20年后占据了20%的流域,30年后增加到80%。 69年后,预测是95%的占用率。因此,该IBM的开发成功地模拟了这种小型侵入性鱼的范围扩展动态,ABC提高了模拟精度。这种组合的方法还强调,亚成年分散更可能导致快速的殖民化率而不是建议的专家意见。这些结果强调了时间序列数据的重要性,以便通常提高我们对分散行为和范围扩展动态的理解。

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