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Adaptive resolution molecular dynamics technique: Down to the essential

机译:自适应分辨率分子动力学技术:下降至必要

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We investigate the role of the thermodynamic (TD) force as an essential and sufficient technical ingredient for an efficient and accurate adaptive resolution algorithm. Such a force applied in the coupling region of an adaptive resolution molecular dynamics setup assures thermodynamic equilibrium between atomistically resolved and coarse-grained regions, allowing the proper exchange of molecules. We numerically prove that indeed for systems as relevant as liquid water and 1,3-dimethylimidazolium chloride ionic liquid, the combined action of the TD force and thermostat allows for computationally efficient and numerically accurate simulations, beyond the current capabilities of adaptive resolution setups, which employ switching functions in the coupling region. Published by AIP Publishing.
机译:我们调查热力学(TD)力作为高效准确的自适应分辨率算法的必要和充分技术成分的作用。 在自适应分辨率分子动力学设置的耦合区域中施加的这种力确保了原始分离和粗粒区域之间的热力学平衡,从而允许正确交换分子。 在数值上证明,对于与液态水和1,3-二甲基咪唑离子液相关的系统,TD力和恒温器的组合作用允许计算高效和数值准确的模拟,超出自适应分辨率设置的当前能力,这 采用耦合区域中的切换功能。 通过AIP发布发布。

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