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首页> 外文期刊>Medical Physics >Technical note: RabbitCT--an open platform for benchmarking 3D cone-beam reconstruction algorithms.
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Technical note: RabbitCT--an open platform for benchmarking 3D cone-beam reconstruction algorithms.

机译:技术说明:Rabbitct - 用于基准测试3D锥形束重建算法的开放式平台。

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摘要

PURPOSE: Fast 3D cone beam reconstruction is mandatory for many clinical workflows. For that reason, researchers and industry work hard on hardware-optimized 3D reconstruction. Backprojection is a major component of many reconstruction algorithms that require a projection of each voxel onto the projection data, including data interpolation, before updating the voxel value. This step is the bottleneck of most reconstruction algorithms and the focus of optimization in recent publications. A crucial limitation, however, of these publications is that the presented results are not comparable to each other. This is mainly due to variations in data acquisitions, preprocessing, and chosen geometries and the lack of a common publicly available test dataset. The authors provide such a standardized dataset that allows for substantial comparison of hardware accelerated backprojection methods. METHODS: They developed an open platform RabbitCT (www.rabbitCT.com) for worldwide comparison in backprojection performance and ranking on different architectures using a specific high resolution C-arm CT dataset of a rabbit. This includes a sophisticated benchmark interface, a prototype implementation in C++, and image quality measures. RESULTS: At the time of writing, six backprojection implementations are already listed on the website. Optimizations include multithreading using Intel threading building blocks and OpenMP, vectorization using SSE, and computation on the GPU using CUDA 2.0. CONCLUSIONS: There is a need for objectively comparing backprojection implementations for reconstruction algorithms. RabbitCT aims to provide a solution to this problem by offering an open platform with fair chances for all participants. The authors are looking forward to a growing community and await feedback regarding future evaluations of novel software- and hardware-based acceleration schemes.
机译:目的:对于许多临床工作流程,快速3D锥形重建是强制性的。出于这个原因,研究人员和行业在硬件优化的3D重建上努力工作。 BackPropre是许多重建算法的主要组成部分,其需要在更新体素值之前将每个体素的投影投影到包括数据插值的投影数据。该步骤是大多数重建算法的瓶颈和最近出版物的优化焦点。然而,这些出版物的一个至关重要的限制是所提出的结果彼此不相媲美。这主要是由于数据采集,预处理和所选几何形状的变化以及缺少公共可公共测试数据集。作者提供了这样一个标准化数据集,其允许对硬件加速的反投影方法进行大量比较。方法:他们开发了一个开放式平台Rabbitct(www.rabbitct.com),用于在BackProject性能中进行全球比较,并使用兔子的特定高分辨率C-ARM CT数据集对不同的架构进行排序。这包括一个复杂的基准接口,C ++中的原型实现以及图像质量措施。结果:在撰写本文时,网站上列出了六种反投影实现。优化包括使用英特尔线程构建块和OpenMP,使用SSE的矢量化和使用CUDA 2.0的GPU计算的多线程。结论:需要客观地比较重建算法的反调实现。 Rabbitct旨在通过为所有参与者提供公平机会的开放式平台来提供解决这个问题的解决方案。作者期待着越来越多的社区,并等待关于未来对新型软件和基于硬件的加速计划的评估的反馈。

著录项

  • 来源
    《Medical Physics》 |2009年第9期|共5页
  • 作者

    Rohkohl C; Keck B; Hofmann HG;

  • 作者单位

    Department of Computer Science Chair of Pattern Recognition Friedrich-Alexander University Erlangen-Nuremberg Martensstrasse 3 91058 Erlangen Germany.;

  • 收录信息
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类 基础医学;
  • 关键词

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