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首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >Structural Character and Energetics of Tyrosyl Radical Formation by Electron/Proton Transfers of a Covalently Linked Histidine-Tyrosine:A Model for Cytochrome c Oxidase
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Structural Character and Energetics of Tyrosyl Radical Formation by Electron/Proton Transfers of a Covalently Linked Histidine-Tyrosine:A Model for Cytochrome c Oxidase

机译:电子/质子共价连接的组氨酸-酪氨酸的电子/质子转移形成酪氨酰自由基的结构特征和能量学:细胞色素c氧化酶的模型

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摘要

The structural,energetic,and electronic and IR spectroscopic properties for a model of the cross-linked histidine-tyrosine (His-Tyr) residues as found in cytochrome c oxidase (CcO) are investigated by ab initio methods.The formation of a His-Tyr radical is studied by two paths:proton release followed by electron release and vice versa.The energetics for the proton/electron releases of the Tyr depend modestly on the cross-linked His substituent and,more sensitively,on the charge of the cation attached to the imino N site of the His residue.Protonation of the imino N site significantly increases the electron ionization potential and decreases the proton dissociation energy,making them competitive processes.A positive charge placed at the imino N site,whose value is scanned from zero to one,shows a continuous increase in ionization potential and a decrease in proton dissociation energy,with the +1 limit agreeing well with the protonated imino N site result,indicating a dominant electrostatic effect.The charge populations and the spin density distributions of the His-Tyr model,the radical cation formed by electron ionization,the anion formed by proton dissociation,and the final His-Tyr radical depend sensitively on the substituents,implying a modulation role on the charge transfer between the phenol and imidazole rings,especially for the charged species.His-Tyr and protonated His-Tyr exhibit differences among their respective structural isomers with consequences on their IR absorptions.Small barriers between their pseudo-cis and pseudo-trans rotamers demonstrate the relative flexibility between the two rings,and these may facilitate proton release and charge transfer.The cation effect demonstrates that the cationized cross-linked His-Tyr should be the best candidate to mimic the covalently ring-linked histidine-tyrosine structure in CcO.
机译:通过从头算方法研究了在细胞色素c氧化酶(CcO)中发现的交联组氨酸-酪氨酸(His-Tyr)残基模型的结构,能量,电子和IR光谱特性。通过两个途径研究Tyr自由基:质子释放然后是电子释放,反之亦然.Tyr的质子/电子释放的能量学适度取决于交联的His取代基,更敏感地取决于所附着的阳离子的电荷亚胺N位的质子化显着增加电子电离势并降低质子离解能,使其成为竞争过程。亚胺N位上带有正电荷,其值从零开始扫描到1,表明电离势持续增加,质子离解能降低,+ 1极限与质子化亚氨基N位点结果吻合良好,表明占主导地位的电稳定tic效应.His-Tyr模型的电荷总数和自旋密度分布,电子电离形成的自由基阳离子,质子离解形成的阴离子以及最终的His-Tyr自由基敏感地依赖于取代基,这意味着调节作用酚和咪唑环之间的电荷转移,特别是对于带电荷的物种.His-Tyr和质子化的His-Tyr在各自的结构异构体之间表现出差异,从而影响其IR吸收。​​假-顺式和假-反式之间的小势垒阳离子效应表明,阳离子化交联的His-Tyr应该是模拟共价环连接的组氨酸-酪氨酸结构的最佳候选者。主管

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