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首页> 外文期刊>The journal of physical chemistry, B. Condensed matter, materials, surfaces, interfaces & biophysical >On the Calculation of Diffusion Coefficients in Confined Fluids and Interfaces with an Application to the Liquid-Vapor Interface of Water
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On the Calculation of Diffusion Coefficients in Confined Fluids and Interfaces with an Application to the Liquid-Vapor Interface of Water

机译:密闭流体和界面中扩散系数的计算及其在水液-气界面中的应用

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We propose a general methodology for calculating the self-diffusion tensor from molecular dynamics (MD) for a liquid with a liquid-gas or liquid-solid interface.The standard method used in bulk fluids,based on computing the mean square displacement as a function of time and extracting the asymptotic linear time dependence from this,is not valid for systems with interfaces or for confined fluids.The method proposed here is based on imposing virtual boundary conditions on the molecular system and computing survival probabilities and specified time correlation functions in different layers of the fluid up to and including the interfacial layer.By running dual simulations,one based on MD and the other based on Langevin dynamics,using the same boundary conditions,one can fit the Langevin survival probability at long time to the MD computed survival probability,thereby determining the diffusion coefficient as a function of distance of the layers from the interface.We compute the elements of the diffusion tensor of water as a function of distance from the liquid vapor interface of water.Far from the interface the diffusion tensor is found to be isotropic,as expected,and the diffusion coefficient has the value Dapprox=0.22 A~2/ps,in agreement with what is found in the bulk liquid.In the interfacial region the diffusion tensor is axially anisotropic,with values of D_(||) approx=0.8 A~2/ps and D_perpendicular approx=0.5 A~2/ps for the components parallel and normal the interface surface,respectively.We also show that diffusion in confined geometries can be calculated by imposing appropriate boundary conditions on the molecular system and computing time correlation functions of the eigenfunctions of the diffusion operator corresponding to the same boundary conditions.
机译:我们提出了一种通过分子动力学(MD)计算具有液-气或液-固界面的液体的自扩散张量的通用方法。在散装流体中使用的标准方法是基于计算均方位移作为函数的时间并从中提取渐近线性时间相关性,对于具有界面或受限流体的系统无效。此处提出的方法是基于在分子系统上施加虚拟边界条件并计算生存概率和不同时间的指定时间相关函数通过运行双重仿真,一个基于MD的模型,另一个基于Langevin动力学的模型,使用相同的边界条件,可以运行长时间的Langevin生存概率,以适应MD计算的生存率。概率,从而确定扩散系数作为各层距界面距离的函数。我们计算了水的扩散张量是距水的液体蒸气界面的距离的函数。如预期的那样,从界面的远处发现扩散张量是各向同性的,扩散系数的值为Dapprox = 0.22 A〜2 / ps,在界面区域中,扩散张量在轴向上是各向异性的,其中D_(||)的值大约为0.8 A〜2 / ps,D_垂直的大约为0.5 A〜2 / ps。我们还表明,可以通过在分子系统上施加适当的边界条件并计算与相同边界条件相对应的扩散算子的本征函数的时间相关函数,来计算受限几何结构中的扩散。

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