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Two-way effects between hydrogen bond and intramolecular resonance effect: An ab initio study on complexes of formamide and its derivatives with water

机译:氢键与分子内共振之间的双向效应:从头开始研究甲酰胺及其衍生物与水的配合物

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Ab initio calculations up to MP2/aug-cc-pVTZ//MP2/cc-pVTZ level, including natural charge population and natural resonance theory analyses, have been carried out to study the two-way effects between hydrogen bond (H-bond) and the intramolecular resonance effect by using the H-bonded complexes of formamide (FAO) and its derivatives (FAXs, X represents the heavy atoms in the substituent groups, =CH2, =NH, =SiH2, =PH, and =S) with water as models. Unlike NH3 and NH2CH3 which prefer being H-bond acceptors (HA) to form H-bond with water, the amino groups in the six monomers, because of the resonance effect, prefer being H-bond donors (HD) rather HA. Six monomers can all form HD complexes with water, and only two (FAC and FASi) with the weakest resonance effect are able to form HA complexes with water. The HD H-bond and resonance effect enhance each other (positive two-way effects) whereas the HA H-bond and resonance effect weaken each other (negative two-way effects). The H-bond energies in the six HD complexes are nearly linearly correlated with the weights of the dipolar resonance in Pauling's model and the N-C bond lengths; the correlation coefficients are 0.91 and 0.93, respectively. The positive two-way effects also happens in FAO-water complex, in which the FAO CO group serves as HA (HA(co)). Interestingly, when the HD and HA(co) H-bonds are present in FAO H-bond complex simultaneously, the enhancements are much more significant, and the energies of the two types of H-bonds are much larger than those when only one type of H-bond is present, reflecting the cooperative effects. By using the knowledge to the two-way effects, we computationally designed a molecule (FAO-BH3) to increase H-bond energy. Because of the oxygen lone pair donation to the empty pi orbital of BH3, FAO-BH3 has a much stronger resonance effect than FAO. As a result, the H-bond energy (-5.55 kcal/mol) in HD H2O center dot center dot center dot FAO-BH3 complex is much greater than the -3.30 kcal/mol in the HD H2O center dot center dot center dot FAO complex. The two-way effects can be rationalized as follows: the resonance effect leads to intramolecular charge shifts in the monomers which facilitate or prevent the charge donation or acceptation of their H-bond partners. Therefore, the H-bonds are strengthened or weakened. In reverse, the charge donations or acceptations of their H-bond partners facilitate or prevent the intramolecular charge shifts in the monomer moieties, which enhance or weaken the resonance effect. The understanding to the two-way effects may be helpful in drug design and refinement by modulating the H-bond strength and in building empirical H-bond models to study large biological molecules. The study supports Pauling's resonance model.
机译:已经进行了从头算到MP2 / aug-cc-pVTZ // MP2 / cc-pVTZ的计算,包括自然电荷种群和自然共振理论分析,以研究氢键(H键)之间的双向效应使用甲酰胺(FAO)及其衍生物的氢键配合物(FAXs,X代表取代基中的重原子,= CH2,= NH,= SiH2,= PH,= S)的分子内共振效应以水为模特。不同于NH3和NH2CH3较喜欢作为H键受体(HA)与水形成H键,与六个单体中的氨基基团由于共振效应,更喜欢作为H键供体(HD)而不是HA。六个单体都可以与水形成HD络合物,只有两个共振作用最弱的化合物(FAC和FASi)能够与水形成HA络合物。 HD H键和共振效应彼此增强(正双向效应),而HA H键和共振效应彼此弱化(负双向效应)。六个HD络合物中的H键能与Pauling模型中偶极共振的权重和N-C键长度几乎线性相关。相关系数分别为0.91和0.93。在粮农组织-水利综合体中也发生积极的双向影响,其中粮农组织一氧化碳小组为医管局(HA(co))。有趣的是,当在粮农组织的H键复合物中同时存在HD和HA(co)H键时,增强作用更为显着,并且两种类型的H键的能量比仅一种类型时的能量大得多。存在氢键,反映了协同作用。通过将知识用于双向效应,我们通过计算设计了一个分子(FAO-BH3)以增加氢键能。由于向BH3的空pi轨道捐赠了氧孤对,因此FAO-BH3的共振效应要比FAO强得多。结果,HD H2O中心点中心点中心点FAO-BH3络合物中的H键能(-5.55 kcal / mol)远远大于HD H2O中心点中心点中心点FAO-3.30 kcal / mol复杂。可以将双向效应合理化如下:共振效应导致单体中分子内的电荷移动,这有助于或阻止电荷的提供或接受其H键伙伴。因此,氢键被增强或减弱。相反,其氢键伙伴的电荷给予或接受促进或防止了单体部分中的分子内电荷移动,这增强或减弱了共振作用。通过调节氢键强度以及建立经验性氢键模型来研究大型生物分子,对双向作用的了解可能有助于药物设计和改进。该研究支持鲍林的共振模型。

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