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Overcoming time scale and finite size limitations to compute nucleation rates from small scale well tempered metadynamics simulations

机译:克服时间尺度和有限的大小限制,以从小规模的,经过良好调控的元动力学模拟中计算成核率

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摘要

Condensation of a liquid droplet from a supersaturated vapour phase is initiated by a prototypical nucleation event. As such it is challenging to compute its rate from atomistic molecular dynamics simulations. In fact at realistic supersaturation conditions condensation occurs on time scales that far exceed what can be reached with conventional molecular dynamics methods. Another known problem in this context is the distortion of the free energy profile associated to nucleation due to the small, finite size of typical simulation boxes. In this work the problem of time scale is addressed with a recently developed enhanced sampling method while contextually correcting for finite size effects. We demonstrate our approach by studying the condensation of argon, and showing that characteristic nucleation times of the order of magnitude of hours can be reliably calculated. Nucleation rates spanning a range of 10 orders of magnitude are computed at moderate supersaturation levels, thus bridging the gap between what standard molecular dynamics simulations can do and real physical systems. Published by AIP Publishing.
机译:来自超饱和气相的液滴的冷凝是由原型成核事件引发的。因此,从原子分子动力学模拟计算其速率具有挑战性。实际上,在实际的过饱和条件下,缩合发生的时间尺度远远超过了常规分子动力学方法所能达到的水平。在这种情况下,另一个已知的问题是由于典型模拟盒的小而有限的尺寸,与成核相关的自由能曲线的变形。在这项工作中,时标问题是通过最近开发的增强采样方法解决的,同时根据上下文对有限大小的影响进行了校正。我们通过研究氩气的冷凝来证明我们的方法,并表明可以可靠地计算出数小时量级的特征形核时间。在中等的过饱和水平下计算出范围在10个数量级范围内的成核速率,从而弥合了标准分子动力学模拟可以做的工作与实际物理系统之间的差距。由AIP Publishing发布。

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