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首页> 外文期刊>The Journal of Chemical Physics >Adaptive deployment of model reductions for tau-leaping simulation
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Adaptive deployment of model reductions for tau-leaping simulation

机译:自适应部署模型缩减以进行tau-leaping仿真

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摘要

Multiple time scales in cellular chemical reaction systems often render the tau-leaping algorithm inefficient. Various model reductions have been proposed to accelerate tau-leaping simulations. However, these are often identified and deployed manually, requiring expert knowledge. This is time-consuming and prone to error. In previous work, we proposed a methodology for automatic identification and validation of model reduction opportunities for tau-leaping simulation. Here, we show how the model reductions can be automatically and adaptively deployed during the time course of a simulation. For multiscale systems, this can result in substantial speedups. (C) 2015 AIP Publishing LLC.
机译:细胞化学反应系统中的多个时间尺度通常使tau-leaping算法效率低下。已提出各种模型简化来加速tau-leaping仿真。但是,这些通常是手动识别和部署的,需要专业知识。这很耗时并且容易出错。在以前的工作中,我们提出了一种自动识别和验证tau-leaping仿真模型减少机会的方法。在这里,我们展示了如何在仿真的时间过程中自动并自适应地部署模型简化。对于多尺度系统,这可能会导致明显的加速。 (C)2015 AIP Publishing LLC。

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