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Isotropic periodic sum of electrostatic interactions for polar systems

机译:极性系统静电相互作用的各向同性周期和

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Isotropic periodic sum (IPS) is a method to calculate long-range interactions based on homogeneity of simulation systems. Long-range interactions are represented by interactions with isotropic periodic images of a defined local region and can be reduced to short ranged IPS potentials. The original electrostatic three-dimensional (3D)-IPS potential was derived based on a nonpolar homogeneous approximation and its application is limited to nonpolar or weak polar systems. This work derived a polar electrostatic 3D-IPS potential based on polar interactions. For the convenience of application, polynomial functions with rationalized coefficients are proposed for electrostatic and Lennard-Jones 3D-IPS potentials. Model systems of various polarities and several commonly used solvent systems are simulated to evaluate the 3D-IPS potentials. It is demonstrated that for polar systems the polar electrostatic 3D-IPS potential has much improved accuracy as compared to the nonpolar 3D-IPS potential. For homogeneous systems, the polar electrostatic 3D-IPS potential with a local region radius or cutoff distance of as small as 10 ? can satisfactorily reproduce energetic, structural, and dynamic properties from the particle-meshed-Ewald method. For both homogeneous and heterogeneous systems, the 3D-IPS/discrete fast Fourier transform method using either the nonpolar or the polar electrostatic 3D-IPS potentials results in very similar simulation results.
机译:各向同性周期和(IPS)是一种基于仿真系统的同质性来计算远程相互作用的方法。远程相互作用是通过与定义的局部区域的各向同性周期图像的相互作用来表示的,并且可以减少到短程IPS电位。原始的静电三维(3D)-IPS电位是基于非极性均匀逼近得出的,其应用仅限于非极性或弱极性系统。这项工作基于极性相互作用得出了极性静电3D-IPS电位。为了方便应用,针对静电和Lennard-Jones 3D-IPS电势,提出了具有合理系数的多项式函数。模拟了各种极性的模型系统和几种常用的溶剂系统,以评估3D-IPS电位。已经证明,对于极性系统,与非极性3D-IPS电位相比,极性静电3D-IPS电位具有大大提高的精度。对于均质系统,极性静电3D-IPS电位的局部区域半径或截止距离小至10?可以通过粒子网状Ewald方法令人满意地重现能量,结构和动态特性。对于均质和异质系统,使用非极性或极性静电3D-IPS电位的3D-IPS /离散快速傅里叶变换方法都会产生非常相似的仿真结果。

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