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首页> 外文期刊>The Journal of Chemical Physics >A fast multipoe method combined with a reaction field for ong-range electrostatics in molecular dynamics simulations: The effects of truncation on the properties of water
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A fast multipoe method combined with a reaction field for ong-range electrostatics in molecular dynamics simulations: The effects of truncation on the properties of water

机译:快速多极子方法与反应场相结合的分子动力学模拟中的远距离静电:截断对水性质的影响

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We present a combination of the structure adapted multipole method with a reaction field (RF) correction for the efficient evaluation of electrostatic interactions in molecular dynamics simulations under periodic boundary conditions. The algorithm switches from an explicit electrostatics evaluation to a continuum description at the maximal distance that is consistent with the minimum image convention, and, thus, avoids the use of a periodic electrostatic potential. A physically motivated switching function enables charge clusters interacting with a given charge to smoothly move into the solvent continuum by passing through the spherical dielectric boundary surrounding this charge. This transition is complete as soon as the cluster has reached the so-called truncation radius R_c. The algorithm is used to examine the dependence of thermodynamic properties and correlation functions on R_c in the three point transferable intermolecular potential water model. Our test simulations on pure liquid water used either the RF correction or a straight cutoff and values of R_c ranging from 14 A to 40 A. In the RF setting, the thermodynamic properties and the correlation functions show convergence for R_c increasing towards 40 A. In the straight cutoff case no such convergence is found. Here, in particular, the dipole-dipole correlation functions become completely artificial. The RF description of the long-range electrostatics is verified by comparison with the results of a particle-mesh Ewald simulation at identical conditions.
机译:我们提出了结构适应的多极方法与反应场(RF)校正的组合,用于在周期性边界条件下对分子动力学模拟中的静电相互作用进行有效评估。该算法从显式的静电评估转换为与最小图像约定一致的最大距离处的连续描述,因此避免了使用周期性静电势。物理上的开关功能使电荷簇与给定电荷相互作用,使其通过围绕该电荷的球形介电边界而平滑地进入溶剂连续体。一旦簇达到所谓的截断半径R_c,该过渡就完成了。该算法用于检验三点可转移分子间势水模型中热力学性质和相关函数对R_c的依赖性。我们在纯净液态水上的测试模拟使用了RF校正或直接截止,R_c的值范围为14 A至40A。在RF设置中,热力学性质和相关函数表明R_c的收敛性逐渐提高到40A。在直截界情况下,找不到这种收敛。在此,尤其是偶极子-偶极子相关函数完全变得人为。通过与相同条件下的粒子网格Ewald模拟结果进行比较,可以验证长距离静电的RF描述。

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