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Strategies for multiscale modeling and simulation of organic materials: polymers and biopolymers

机译:有机材料:聚合物和生物聚合物的多尺度建模和仿真策略

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摘要

Advances in theory and methods are making it practical to consider fully first principles (de novo) predictions of structures, properties and processes for organic materials. However, despite the progress there remains an enormous challenge in bridging the vast range of distances and time scales between de novo atomistic simulations and the quantitative continuum models for the macroscopic systems essential in industrial design and operations. Recent advances relevant to such developments include: quantum chemistry including continuum solvation and force field embedding, de novo force fields to describe phase transitions, molecular dynamics (MD) including continuum solvent, non equilibrium MD for rheology and thermal conductivity and mesoscale simulations. To provide some flavor for the opportunities we will illustrate some of the progress and challenges by summarizing some recent developments in methods and their applications to polymers and biopolymers. Four different topics will be covered: (1) hierarchical modeling approach applied to modeling olfactory receptors, (2) stabilization of leucine zipper coils by introduction of trifluoroleucine, (3) modeling response of polymers sensors for electronic nose, and (4) diffusion of gases in amorphous polymers.
机译:理论和方法的进步使得考虑有机材料的结构,特性和过程的完全首要原则(从头开始)的预测变得可行。然而,尽管取得了进展,但是在桥接从头原子模拟与工业设计和操作中必不可少的宏观系统的定量连续模型之间的距离和时间尺度的广泛范围方面,仍然存在巨大的挑战。与此类开发相关的最新进展包括:量子化学(包括连续溶剂化和力场嵌入),描述相变的从头力场,分子动力学(MD)(包括连续溶剂),用于流变学和热导率的非平衡MD以及中尺度模拟。为了给机会提供一些风味,我们将通过概述方法的最新进展及其在聚合物和生物聚合物中的应用来说明一些进展和挑战。将涵盖四个不同的主题:(1)用于建模嗅觉受体的分层建模方法,(2)通过引入三氟亮氨酸来稳定亮氨酸拉链线圈,(3)建模电子鼻的聚合物传感器的响应,以及(4)扩散非晶态聚合物中的气体。

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