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A method of extracting structural priors from images of micro-CT for fluorescence molecular tomography reconstruction

机译:一种从微CT图像中提取结构先验的方法,用于荧光分子层析成像重建

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摘要

The dual-modality systems combined fluorescence molecular tomography (FMT) and micro-computed tomography (micro-CT) can provide molecular and anatomical information of small animals simultaneously. Except for anatomic localization, micro-CT should also offer boundary of different organs as reconstruction priors for FMT, which is more challenging than acquisition of structural information. In this paper, we propose a framework to extract structural priors of a living mouse with micro-CT. The iodinated lipid emulsion contrast agent was adopted to enhance the contrast of the soft tissues of the mouse. Then organs in thorax and abdomen were segmented with different approaches depending on the characteristics of the organs. Bone, lung, heart, liver, spleen, and muscles were separately segmented. And the results were compared with that manually segmented. The Tanimoto coefficient and the relative volume difference of segmented slices were measured to be 91.28 ± 5.78 and 0.27 ± 3.15, respectively. In our simulation study of FMT reconstruction, the errors of measured position and concentration of the fluorophore with priors declined by 89.7% and 79.6% in thorax, as well as 80.8% and 78.3% in abdomen, respectively, compared with the results without priors. The proposed scheme will make FMT reconstruction much more reliable and practical in small animal study.
机译:结合了荧光分子断层扫描(FMT)和微计算机断层扫描(micro-CT)的双模态系统可以同时提供小动物的分子和解剖学信息。除了解剖定位外,微CT还应提供不同器官的边界作为FMT的重建先验,这比获取结构信息更具挑战性。在本文中,我们提出了一个框架来提取具有微CT的活体小鼠的结构先验。采用碘化脂质乳剂造影剂来增强小鼠软组织的对比度。然后根据器官的特征用不同的方法分割胸腔和腹部的器官。分别分割骨骼,肺,心脏,肝脏,脾脏和肌肉。并将结果与​​手动分段的结果进行比较。经测量,Tanimoto系数和分段切片的相对体积差分别为91.28±5.78和0.27±3.15。在我们对FMT重建的模拟研究中,与先验结果相比,先验荧光团的位置和浓度的误差在先胸中分别降低了89.7%和79.6%,在腹部中分别降低了80.8%和78.3%。拟议的方案将使FMT重建在小动物研究中更加可靠和实用。

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