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Blood-based lung cancer biomarkers identified through proteomic discovery in cancer tissues, cell lines and conditioned medium

机译:通过蛋白质组学在癌症组织,细胞系和条件培养基中发现的基于血液的肺癌生物标志物

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Background: Support for early detection of lung cancer has emerged from the National Lung Screening Trial (NLST), in which low-dose computed tomography (LDCT) screening reduced lung cancer mortality by 20 % relative to chest x-ray. The US Preventive Services Task Force (USPSTF) recently recommended annual screening for the high-risk population, concluding that the benefits (life years gained) outweighed harms (false positive findings, abortive biopsy/surgery, radiation exposure). In making their recommendation, the USPSTF noted that the moderate net benefit of screening was dependent on the resolution of most false-positive results without invasive procedures. Circulating biomarkers may serve as a valuable adjunctive tool to imaging.Results: We developed a broad-based proteomics discovery program, integrating liquid chromatography/mass spectrometry (LC/MS) analyses of freshly resected lung tumor specimens (n= 13), lung cancer cell lines (n = 17), and conditioned media collected from tumor cell lines (n = 7). To enrich for biomarkers likely to be found at elevated levels in the peripheral circulation of lung cancer patients, proteins were prioritized based on predicted subcellular localization (secreted, cell-membrane associated) and differential expression in disease samples. 179 candidate biomarkers were identified. Several markers selected for further validation showed elevated levels in serum collected from subjects with stage I NSCLC (n = 94), relative to healthy smoker controls (n = 189).
机译:背景:国家肺癌筛查试验(NLST)已支持早期发现肺癌,其中低剂量计算机断层扫描(LDCT)筛查相对于胸部X线检查可将肺癌死亡率降低20%。美国预防服务工作队(USPSTF)最近建议对高危人群进行年度筛查,认为其益处(获得的生命年数)大于危害(假阳性结果,流产活检/手术,放射线照射)。 USPSTF在提出建议时指出,筛查的中等净收益取决于对大多数假阳性结果的解决方案,而无需采用侵入性程序。结果:我们开发了一个基础广泛的蛋白质组学发现程序,该程序结合了液相色谱/质谱(LC / MS)对新鲜切除的肺肿瘤标本(n = 13),肺癌的分析细胞系(n = 17),以及从肿瘤细胞系收集的条件培养基(n = 7)。为了丰富可能在肺癌患者外周循环中升高的水平的生物标志物,根据疾病样本中预测的亚细胞定位(分泌的,与细胞膜相关的)和差异表达,对蛋白质进行优先排序。确定了179个候选生物标记。相对于健康的吸烟者对照(n = 189),选择用于进一步验证的几种标记物显示,从患有I期NSCLC的受试者(n = 94)收集的血清中血清水平升高。

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