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首页> 外文期刊>Journal of proteome research >A multivariate screening strategy for investigating metabolic effects of strenuous physical exercise in human serum
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A multivariate screening strategy for investigating metabolic effects of strenuous physical exercise in human serum

机译:研究剧烈体育锻炼对人血清代谢影响的多元筛选策略

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摘要

A novel hypothesis-free multivariate screening methodology for the study of human exercise metabolism in blood serum is presented. Serum gas chromatography/ time-of-flight mass spectrometry ( GC/TOFMS) data was processed using hierarchical multivariate curve resolution ( H-MCR), and orthogonal partial least-squares discriminant analysis ( OPLS-DA) was used to model the systematic variation related to the acute effect of strenuous exercise. Potential metabolic biomarkers were identified using data base comparisons. Extensive validation was carried out including predictive H-MCR, 7-fold full cross-validation, and predictions for the OPLS-DA model, variable permutation for highlighting interesting metabolites, and pairwise t tests for examining the significance of metabolites. The concentration changes of potential biomarkers were verified in the raw GC/TOFMS data. In total, 420 potential metabolites were resolved in the serum samples. On the basis of the relative concentrations of the 420 resolved metabolites, a valid multivariate model for the difference between pre- and postexercise subjects was obtained. A total of 34 metabolites were highlighted as potential biomarkers, all statistically significant ( p< 8.1E-05). As an example, two potential markers were identified as glycerol and asparagine. The concentration changes for these two metabolites were also verified in the raw GC/TOFMS data. The strategy was shown to facilitate interpretation and validation of metabolic interactions in human serum as well as revealing the identity of potential markers for known or novel mechanisms of human exercise physiology. The multivariate way of addressing metabolism studies can help to increase the understanding of the integrative biology behind, as well as unravel new mechanistic explanations in relation to, exercise physiology.
机译:提出了一种新的无假设的多元筛选方法,用于研究人体运动在血清中的代谢。使用分层多元曲线分辨率(H-MCR)处理血清气相色谱/飞行时间质谱(GC / TOFMS)数据,并使用正交偏最小二乘判别分析(OPLS-DA)建模系统差异与剧烈运动的急性作用有关。使用数据库比较鉴定潜在的代谢生物标志物。进行了广泛的验证,包括预测性H-MCR,7倍全交叉验证和OPLS-DA模型的预测,突出显示有趣代谢物的可变排列以及成对t检验以检查代谢物的重要性。在原始GC / TOFMS数据中验证了潜在生物标志物的浓度变化。血清样品中总共分离出420种潜在代谢物。基于420种分解代谢产物的相对浓度,获得了运动前后受试者之间差异的有效多变量模型。共有34种代谢物被突出显示为潜在的生物标志物,均具有统计学意义(p <8.1E-05)。例如,两个潜在的标志物被确定为甘油和天冬酰胺。还在原始GC / TOFMS数据中验证了这两种代谢物的浓度变化。该策略显示出有助于人类血清中代谢相互作用的解释和验证,并揭示了人类运动生理机制的已知或新颖机制的潜在标志物。应对代谢研究的多元方法可以帮助增加对背后整合生物学的理解,并阐明与运动生理学有关的新机制解释。

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