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Concordance in Diagnostic Testing for Respiratory Pathogens of Bighorn Sheep

机译:大角羊呼吸道病原体诊断测试的一致性

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Reliable diagnostic tests are essential for disease investigation and management. This is particularly true for diseases of free-ranging wildlife where sampling is logistically difficult precluding retesting. Clinical assays for wildlife diseases frequently vary among laboratories because of lack of appropriate standardized commercial kits. Results of diagnostic testing may also be called into question when investigators report different etiologies for disease outbreaks, despite similar clinical andpathologic findings. To evaluate reliability of diagnostic testing for respiratory pathogens of bighorn sheep (Ovis canadensis), we conducted a series of ring tests across 6 laboratories routinely involved in detection of Mycoplasma ovipneumoniae, Pasteurellaceae, lktA (the Pasteurellaceae gene encoding leukotoxin), and 3 reference laboratories. Consistency of results for replicate samples within laboratories was high (median agreement = 1.0). Agreement between laboratories was high for polymerase chainreaction (PCR) detection ofM. ovipneumoniae and culture isolation of Mannheimia spp. and Bibersteinia trehalosi (median agreement = 0.89-0.95, Kappa = 0.65-0.74), and lower for PCR detection of Mannheimia spp. lktA (median agreement = 0.58, Kappa = 0.12). Most errors on defined status samples were false negatives, suggesting test sensitivitywas a greater problem than specificity. However, tests for M. haemolytica and lktA yielded some false positive results. Despite differences in testing protocols, median agreement among laboratories and correct classification of controls for most agents was >0.80, meeting or exceeding the standard required by federal proficiency testing programs. This information is valuable for interpreting test results, laboratoryquality assessments, and advancing diagnosis of respiratory disease in wild sheep. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.
机译:可靠的诊断测试对于疾病调查和管理至关重要。对于自由放养的野生动植物的疾病尤其如此,因为采样后勤上很难进行复测。由于缺乏适当的标准化商业试剂盒,野生动物疾病的临床检测方法经常在实验室之间变化。尽管临床和病理学发现相似,但当研究人员报告疾病暴发的不同病因时,诊断测试的结果也可能会受到质疑。为了评估大角羊(Ovis canadensis)呼吸道病原体诊断测试的可靠性,我们在6个常规检测卵圆形支原体,巴氏杆菌,lktA(编码白粉菌的巴氏杆菌基因)的实验室和3个参考实验室进行了一系列环试验。实验室中重复样本的结果一致性很高(中位数协议= 1.0)。实验室之间对M的聚合酶链反应(PCR)检测的协议很高。曼氏菌的分离和分离。和曼氏海藻(Bibersteinia trehalosi)(中位数协议= 0.89-0.95,Kappa = 0.65-0.74),以及更低的值用于曼氏菌属的PCR检测。 lktA(中位数协议= 0.58,Kappa = 0.12)。定义状态样本上的大多数错误均为假阴性,这表明测试灵敏度是一个比特异性更大的问题。但是,溶血支原体和lktA的检测产生了一些假阳性结果。尽管测试协议有所不同,但大多数代理商之间的实验室中间协议和正确的控制分类仍> 0.80,达到或超过了联邦水平测试计划所要求的标准。这些信息对于解释测试结果,实验室质量评估以及促进野绵羊呼吸系统疾病的诊断非常有价值。 2016年发布。本文是美国政府的工作,在美国属于公共领域。

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