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Screening and Characterization of a Cellulase Gene from the Gut Microflora of Abalone Using Metagenomic Library

机译:利用元基因组文库筛选和鉴定鲍鱼肠道菌群纤维素酶基因

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摘要

A metagenomic fosmid library was constructed using genomic DNA isolated from abalone intestine. Screening of a library of 3,840 clones revealed a 36 kb insert of a cellulase positive clone (pAMHElO). A shotgun clone library was constructed using the positive clone (pAMHElO) and further screening of 3,840 shotgun clones with an approximately 5 kb insert size using a Congo red overlay revealed only one cellulase positive clone (pAMHL9). The pAMHL9 consisted of a 5,293-bp DNA sequence and three open reading frames (ORFs). Among the three ORFs, cellulase activity was only shown in the recombinant protein (CelAMll) coded by ORF3, which showed 100% identity with outer membrane protein A from Vibrio alginolyticus 12G01, but no significant sequence homology to known cellulases. The expressed protein (CelAMll) has a molecular weight of approximately 37 kDa and the highest CMC hydrolysis activity was observed at pH 7. 0 and 37°C. The carboxymethyl cellulase activity was determined by zymogram active staining and different degraded product profiles for CelAMll were obtained when cellotetraose and cellopentaose were used as the substrates, while no substrate hydrolysis was observed on oligosaccharides such as cellobiose and cellotriose.
机译:使用从鲍鱼肠中分离的基因组DNA构建宏基因组的fosmid文库。对3,840个克隆的文库的筛选揭示了纤维素酶阳性克隆(pAMHE10)的36kb插入片段。使用阳性克隆(pAMHE10)构建了gun弹枪克隆文库,并且使用刚果红覆盖物进一步筛选了具有约5kb插入大小的3,840个shot弹枪克隆,揭示了仅一个纤维素酶阳性克隆(pAMHL9)。 pAMHL9由一个5293 bp的DNA序列和三个开放阅读框(ORF)组成。在这三个ORF中,纤维素酶活性仅在ORF3编码的重组蛋白(CelAMII)中显示,该蛋白与溶藻弧菌12G01的外膜蛋白A具有100%的同一性,但与已知的纤维素酶没有明显的序列同源性。表达的蛋白质(CelAMII)具有约37kDa的分子量,并且在pH 7、0和37℃下观察到最高的CMC水解活性。通过酶谱活性染色确定羧甲基纤维素酶活性,并且当使用纤维四糖和纤维戊糖作为底物时获得CelAM11的不同降解产物概况,而在低聚糖如纤维二糖和纤维三糖上未观察到底物水解。

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