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首页> 外文期刊>Proteomics. Clinical applications >Analysis of urinary proteomic patterns for diabetic nephropathy by ProteinChip
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Analysis of urinary proteomic patterns for diabetic nephropathy by ProteinChip

机译:用蛋白质芯片分析糖尿病肾病的尿蛋白质组学模式

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Diabetic nephropathy (DN) is the main cause of mortality for diabetic patients. The objective of this work was to develop a proteomic approach to detect proteins or peptides in urine for identifying individuals in the early stage of DN. We obtained urine samples from 106 diabetic patients and 50 healthy subjects. Early stage of DN was defined as urine albumin-to-creatinine ratio between 30 to 299 mg/g. Mass spectra were generated using surface-enhanced laser desorption/ ionization time-of-flight mass spectrometry. Peaks were detected by Ciphergen SELDI software version 3.1. Over 1000 proteins or peptides were obtained using ProteinChip. About 200 of them, the m/z values were in the range from 1008.5 to 79 942.3 Da. These values were significantly differentiated between diabetic patients and control subjects. A mathematical analysis revealed that a cluster of 8 up-regulated proteins and 16 down-regulated proteins was in the diabetic patients, with m/z values from 2197.3 to 79 613 Da. Four top-ranked proteins, with m/z values of 4139.0, 4453.5, 5281.1, and 5898.5 Da, were selected as the potential fingerprints for detection of early stage DN with a sensitivity of 75% and a specificity of 80%. ProteinChip technology may be a novel non-invasive method for detecting early stage DN.
机译:糖尿病肾病(DN)是糖尿病患者死亡的主要原因。这项工作的目的是开发一种蛋白质组学方法来检测尿液中的蛋白质或多肽,以识别DN的早期个体。我们从106位糖尿病患者和50位健康受试者中获得了尿液样本。 DN的早期定义为尿白蛋白与肌酐之比在30至299 mg / g之间。使用表面增强的激光解吸/电离飞行时间质谱仪生成质谱。通过Ciphergen SELDI软件3.1版检测峰。使用ProteinChip获得了1000多种蛋白质或肽。其中约200个,m / z值在1008.5至79 942.3 Da之间。这些值在糖尿病患者和对照组之间有显着差异。数学分析显示,糖尿病患者中存在8种上调蛋白和16种下调蛋白的簇,其m / z值为2197.3至79 613 Da。选择m / z值分别为4139.0、4453.5、5281.1和5898.5 Da的四个排名最高的蛋白质作为检测早期DN的潜在指纹,灵敏度为75%,特异性为80%。 ProteinChip技术可能是检测早期DN的一种新颖的非侵入性方法。

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