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An approach to model monitoring and surveillance data of wildlife diseases - exemplified by Classical Swine Fever in wild boar.

机译:一种模型化的野生动物疾病监测和监视数据模型,以野猪中的经典猪瘟为例。

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The analysis of epidemiological field data from monitoring and surveillance systems (MOSSs) in wild animals is of great importance in order to evaluate the performance of such systems. By parameter estimation from MOSS data, conclusions about disease dynamics in the observed population can be drawn. To strengthen the analysis, the implementation of a maximum likelihood estimation is the main aim of our work. The new approach presented here is based on an underlying simple SIR (susceptible-infected-recovered) model for a disease scenario in a wildlife population. The three corresponding classes are assumed to govern the intensities (number of animals in the classes) of non-homogeneous Poisson processes. A sampling rate was defined which describes the process of data collection (for MOSSs). Further, the performance of the diagnostics was implemented in the model by a diagnostic matrix containing misclassification rates. Both descriptions of these MOSS parts were included in the Poisson process approach. For simulation studies, the combined model demonstrates its ability to validly estimate epidemiological parameters, such as the basic reproduction rate R0. These parameters will help the evaluation of existing disease control systems. They will also enable comparison with other simulation models. The model has been tested with data from a Classical Swine Fever (CSF) outbreak in wild boars (Sus scrofa scrofa L.) from a region of Germany (1999-2002). The results show that the hunting strategy as a sole control tool is insufficient to decrease the threshold for susceptible animals to eradicate the disease, since the estimated R0 confirms an ongoing epidemic of CSF.
机译:为了评估此类系统的性能,对来自野生动物监测和监视系统(MOSS)的流行病学现场数据进行分析非常重要。通过从MOSS数据进行参数估计,可以得出有关所观察人群中疾病动态的结论。为了加强分析,最大似然估计的实施是我们工作的主要目的。此处介绍的新方法基于针对野生动物种群中疾病场景的基本简单SIR(易感感染恢复)模型。假定使用三个相应的类别来控制非均匀泊松过程的强度(类别中的动物数量)。定义了采样率,该采样率描述了数据收集过程(对于MOSS)。此外,通过包含错误分类率的诊断矩阵在模型中实现了诊断的性能。这些MOSS部分的两个描述都包含在Poisson过程方法中。对于仿真研究,组合模型展示了其有效估计流行病学参数(例如基本繁殖率R 0 )的能力。这些参数将有助于评估现有疾病控制系统。它们还可以与其他仿真模型进行比较。该模型已使用来自德国地区(1999-2002年)野猪(Sus scrofa scrofa L.)的经典猪瘟(CSF)暴发的数据进行了测试。结果表明,作为估计的唯一控制手段,狩猎策略不足以降低易感动物根除疾病的阈值,因为估计的R 0 证实了CSF的持续流行。

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