首页> 外文期刊>Physics of life reviews >Mechanisms of abiotic horizontal gene transfer. Comment on 'Lightning-triggered electroporation and electrofusion as possible contributors to natural horizontal gene transfer' by Tadej Kotnik.
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Mechanisms of abiotic horizontal gene transfer. Comment on 'Lightning-triggered electroporation and electrofusion as possible contributors to natural horizontal gene transfer' by Tadej Kotnik.

机译:非生物水平基因转移的机制。塔德·科特尼克(Tadej Kotnik)对“雷电触发的电穿孔和电融合可能是自然水平基因转移的贡献者”的评论。

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摘要

Results suggestive of horizontal (lateral) gene transfer, attributed at the time to mutations, have been published since early 20th century [3]. Recent advances in gene sequencing technology have set on solid ground the idea that horizontal (lateral) gene transfer (HTG) is an important factor in evolution [10,11]. There is an increasing interest in this phenomenon [4,8,12], which is now thought to be largely responsible for the growing number of antibiotic resistant bacteria in the world [23]. In this issue, Kotnik, has developed a convincing hypothesis that lightning induced electroporation and electrofusion could be a mechanism for abiotic horizontal gene transfer [13]. Electroporation and electrofusion, described in detail in [13], are mechanisms that involve the application of certain electric fields across a cell and the consequent formation of defects in the cell membrane. These defects can be reversible or irreversible. Reversible electroporation is commonly used for gene transfection and cell fusion while irreversible electroporation is used for cell ablation [13]. Lightning produces a range of electric fields that include those for reversible electro-poration, irreversible electroporation and fusion. It is reasonable to assume that microorganisms and viruses exposed to lightning could be exposed to a combination of electric fields that will produce abiotic horizontal gene transfer, as suggested by Kotnik [13]. In fact, the group of Rafael Lee has shown that lightning can cause irreversible electropo-ration injury to tissue [1,14]. The idea that lighting can cause abiotic lateral gene transfer is somewhat reminiscent of the idea of abiogenesis and the classical experiment of Miller and Urey [17,18]. Could other mechanisms proposed for abiogenesis be also involved in abiotic gene transfer? The clay hypothesis for abiogenesis proposed by Cairns-Smith [2] or the W?chtersh?user [7] hypothesis for an iron sulfur world or Mulkidjanian’s [16] hypothesis of the Zn-world theory leads to thinking about micro and nano electroporation [5,6]. Clays and pyrite are structures with local electric charges. We have shown that when cells pass across surfaces with charges separated by nanometer distances the electric fields that are produced are sufficient to cause electroporation and electrolysis induced reversible and irreversible poration of the cell membrane [20,21]. We have also shown that it is sufficient for only part of the cell membrane to be exposed to electroporation fields for electroporation to occur [5,6]. Fig. 1 illustrates the electric field that would develop across a cell membrane when the cell flows across a substrate in which two small charges with a potential difference of 0.1 V are separated by a 100-nanometer gap. Even in the absence of native charges, an electrolytic process involving Zn and air can produce electric fields that can cause electroporation at the nanoscale [22]. It is interesting to note that these nanoscale electroporation processes may explain the observed abiotic gene transfer in bacteria gaining antibiotic resistance on surfaces [23].
机译:自20世纪初以来,已经出现了暗示水平(横向)基因转移的结果,当时是由于突变引起的[3]。基因测序技术的最新进展奠定了坚实的基础,即水平(横向)基因转移(HTG)是进化的重要因素[10,11]。人们对这种现象越来越感兴趣[4,8,12],现在认为这是世界上抗生素耐药性细菌数量增加的主要原因[23]。在这个问题中,科特尼克(Kotnik)提出了令人信服的假设,即雷电诱导的电穿孔和电融合可能是非生物水平基因转移的机制[13]。在[13]中详细描述的电穿孔和电融合是涉及跨细胞施加一定电场并随后在细胞膜中形成缺陷的机制。这些缺陷可以是可逆的,也可以是不可逆的。可逆电穿孔通常用于基因转染和细胞融合,而不可逆电穿孔则用于细胞消融[13]。闪电会产生一系列电场,其中包括可逆电穿孔,不可逆电穿孔和聚变电场。如科特尼克[13]所建议的那样,可以合理地假设暴露于闪电的微生物和病毒可能会暴露于电场中,这些电场将产生非生物水平基因转移。事实上,拉斐尔·李(Rafael Lee)的研究小组已经证明,雷电可能对组织造成不可逆的电击伤[1,14]。光照可以引起非生物侧向基因转移的想法在某种程度上让人联想到生物发生的想法以及Miller和Urey的经典实验[17,18]。为非生物发生而提出的其他机制是否也可以参与非生物基因转移? Cairns-Smith [2]或W?chtersh?user [7]针对铁硫世界或Mulkidjanian [16]的Zn世界理论的假说提出的针对非生物发生的粘土假说导致人们对微观和纳米电穿孔的思考[ 5,6]。粘土和黄铁矿是带有局部电荷的结构。我们已经表明,当细胞穿过带有纳米间距的电荷的表面时,所产生的电场足以引起电穿孔和电解诱导的细胞膜可逆和不可逆的渗透[20,21]。我们还表明,仅将部分细胞膜暴露于电穿孔场即可发生电穿孔[5,6]。图1展示了当细胞流过基材时会在细胞膜上形成的电场,其中两个电位差为0.1 V的小电荷被100纳米的间隙隔开。即使没有天然电荷,涉及锌和空气的电解过程也会产生电场,从而引起纳米级的电穿孔[22]。有趣的是,这些纳米级电穿孔过程可能解释了在细菌表面获得抗生素抗性的细菌中观察到的非生物基因转移[23]。

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