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OSCILLATOR: A system for analysis of diurnal leaf growth using infrared photography combined with wavelet transformation

机译:振荡器:利用红外照相结合小波变换分析日叶生长的系统

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Background Quantification of leaf movement is an important tool for characterising the effects of environmental signals and the circadian clock on plant development. Analysis of leaf movement is currently restricted by the attachment of sensors to the plant or dependent upon visible light for time-lapse photography. The study of leaf growth movement rhythms in mature plants under biological relevant conditions, e.g. diurnal light and dark conditions, is therefore problematic. Results Here we present OSCILLATOR, an affordable system for the analysis of rhythmic leaf growth movement in mature plants. The system contains three modules: (1) Infrared time-lapse imaging of growing mature plants (2) measurement of projected distances between leaf tip and plant apex (leaf tip tracking growth-curves) and (3) extraction of phase, period and amplitude of leaf growth oscillations using wavelet analysis. A proof-of-principle is provided by characterising parameters of rhythmic leaf growth movement of different Arabidopsis thaliana accessions as well as of Petunia hybrida and Solanum lycopersicum plants under diurnal conditions. The amplitude of leaf oscillations correlated to published data on leaf angles, while amplitude and leaf length did not correlate, suggesting a distinct leaf growth profile for each accession. Arabidopsis mutant accession Landsberg erecta displayed a late phase (timing of peak oscillation) compared to other accessions and this trait appears unrelated to the ERECTA locus. Conclusions OSCILLATOR is a low cost and easy to implement system that can accurately and reproducibly quantify rhythmic growth of mature plants for different species under diurnal light/dark cycling.
机译:背景叶片运动的量化是表征环境信号和生物钟对植物发育影响的重要工具。目前,叶片运动的分析受到传感器与植物的连接的限制,或者依赖于延时摄影的可见光。在生物学相关条件下,例如成熟植物中叶片生长运动节律的研究因此,白天的明暗条件是有问题的。结果在这里,我们介绍了OSCILLATOR,这是一种经济实惠的系统,用于分析成熟植物中有节奏的叶片生长运动。该系统包含三个模块:(1)生长中的成熟植物的红外延时成像(2)测量叶尖与植物顶点之间的预计距离(叶尖跟踪生长曲线),以及(3)提取相位,周期和幅度小波分析的叶片生长振荡通过在昼夜条件下表征不同拟南芥种以及Petunia hybrida和Solanum lycopersicum植物的节律性叶片生长运动的参数来提供原理证明。叶片振荡的振幅与叶片角度的公开数据相关,而振幅和叶片长度却不相关,这表明每种种质都有明显的叶片生长曲线。与其他种质相比,拟南芥突变体种Landsberg erecta表现出后期(峰振荡的时间),而且该性状似乎与ERECTA基因座无关。结论OSCILLATOR是一种低成本,易于实施的系统,可以在昼夜明暗循环下准确,可重复地量化不同物种的成熟植物的节律生长。

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