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首页> 外文期刊>TAG Theoretical and Applied Genetics >Evolutionary origin of the segmental duplication encompassing the wheat GLU-B1 locus encoding the overexpressed Bx7 (Bx7OE) high molecular weight glutenin subunit
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Evolutionary origin of the segmental duplication encompassing the wheat GLU-B1 locus encoding the overexpressed Bx7 (Bx7OE) high molecular weight glutenin subunit

机译:包含小麦GLU-B1基因座的节段重复的进化起源,该基因座编码过表达的Bx7(Bx7 OE )高分子量谷蛋白亚基

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摘要

Sequencing of a BAC clone encompassing the Glu-B1 locus in Glenlea, revealed a 10.3 Kb segmental duplication including the Bx7 gene and flanking an LTR retroelement. To better understand the evolution of this locus, two collections of wheat were surveyed. The first consisted of 96 diploid and tetraploid species accessions while the second consisted of 316 Triticum aestivum cultivars and landraces from 41 countries. The genotypes were first characterized by SDS-PAGE and a total of 40 of the 316 T. aestivum accessions were found to display the overexpressed Bx7 phenotype (Bx7OE). Three lines from the 96 diploid/tetraploid collection also displayed the stronger intensity staining characteristic of the Bx7OE subunit. The relative amounts of the Bx7 subunit to total HMW-GS were quantified by RP-HPLC for all Bx7OE accessions and a number of checks. The entire collection was assessed for the presence of four DNA markers namely an 18 bp indel of the coding region of Bx7 variant alleles, a 43 bp indel of the 5′-region and the left and right junctions of the LTR retrotransposon borders and the duplicated segment. All 43 accessions found to have the Bx7OE subunit by SDS-PAGE and RP-HPLC produced the four diagnostic PCR amplicons. None of the lines without the Bx7OE had the LTR retroelement/duplication genomic structure. However, the 18 and 43 bp indel were found in accessions other than Bx7OE. These results indicate that the overexpression of the Bx7 HMW-GS is likely the result of a single event, i.e., a gene duplication at the Glu-B1 locus mediated by the insertion of a retroelement. Also, the 18 and 43 bp indels pre-date the duplication event. Allelic variants Bx7*, Bx7 with and without 43 bp insert and Bx7 OE were found in both tetraploid and hexaploid collections and shared the same genomic organization. Though the possibility of introgression from T. aestivum to T. turgidum cannot be ruled out, the three structural genomic changes of the B-genome taken together support the hypothesis of multiple polyploidization events involving different tetraploid progenitors.
机译:在Glenlea中对一个包含Glu-B1基因座的BAC克隆进行测序,发现了一个10.3 Kb的节段重复,包括Bx7基因并位于LTR逆转录元件的侧面。为了更好地了解此基因座的演变,对两个小麦品种进行了调查。第一个由96种二倍体和四倍体种组成,第二个由来自41个国家的316个普通小麦和地方品种组成。该基因型首先通过SDS-PAGE鉴定,共发现316种普通小麦中的40种表现出过表达的Bx7表型(Bx7 OE )。 96个二倍体/四倍体集合中的三行也显示出Bx7 OE 亚基的强度染色特性更强。通过RP-HPLC定量分析所有Bx7 OE 登录号和大量检查的Bx7亚基相对于总HMW-GS的相对量。评估整个集合是否存在四个DNA标记,即Bx7变异等位基因编码区的18 bp indel,5'-区和LTR反转录转座子边界的左,右交界处的43 bp indel,以及是否重复分割。通过SDS-PAGE和RP-HPLC发现所有43个具有Bx7 OE 亚基的登录品均产生了四个诊断性PCR扩增子。没有Bx7 OE 的品系都没有LTR逆转录/复制基因组结构。然而,在Bx7 OE 以外的其他种质中发现了18和43 bp插入缺失。这些结果表明,Bx7 HMW-GS的过表达很可能是单个事件的结果,即由插入反义元件介导的在Glu-B1基因座的基因重复。同样,18和43 bp插入缺失在复制事件之前。在四倍体和六倍体集合中均发现了具有和不具有43 bp插入片段和Bx7 OE 的等位基因变体Bx7 *,Bx7,并具有相同的基因组结构。尽管不能排除从小麦到小麦的渗入的可能性,但是B基因组的三个结构基因组变化共同支持了涉及不同四倍体祖细胞的多个多倍化事件的假说。

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