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Fully Automatic Segmentations of Liver and Hepatic Tumors From 3-D Computed Tomography Abdominal Images: Comparative Evaluation of Two Automatic Methods

机译:从3-D计算机断层扫描腹部图像全自动分割肝和肝肿瘤:两种自动方法的比较评估

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摘要

An adaptive initialization method was developed to produce fully automatic processing frameworks based on graph-cut and gradient flow active contour algorithms. This method was applied to abdominal Computed Tomography (CT) images for segmentation of liver tissue and hepatic tumors. Twenty-five anonymized datasets were randomly collected from several radiology centres without specific request on acquisition parameter settings nor patient clinical situation as inclusion criteria. Resulting automatic segmentations of liver tissue and tumors were compared to their reference standard delineations manually performed by a specialist. Segmentation accuracy has been assessed through the following evaluation framework: dice similarity coefficient (DSC), false negative ratio (FNR), false positive ratio (FPR) and processing time. Regarding liver surfaces, graph-cuts achieved a DSC of 95.49% ( ${rm FPR}=2.35%$ and ${rm FNR}=5.10%$), while active contours reached a DSC of 96.17% (${rm FPR}=3.35%$ and ${rm FNR}=3.87%$). The analyzed datasets presented 52 tumors: graph-cut algorithm detected 48 tumors with a DSC of 88.65%, while active contour algorithm detected only 44 tumors with a DSC of 87.10%. In addition, in terms of time performances, less time was requested for graph-cut algorithm with respect to active contour one. The implemented initialization method allows fully automatic segmentation leading to superior overall performances of graph-cut algorithm in terms of accuracy and processing time. The initialization method here presented resulted suitable and reliable for two different segmentation techniques and could be further extended.
机译:开发了一种自适应初始化方法,以基于图割和梯度流活动轮廓算法生成全自动处理框架。此方法应用于腹部计算机断层扫描(CT)图像,以分割肝组织和肝肿瘤。从多个放射学中心随机收集了25个匿名数据集,而没有特别要求获取参数设置或患者临床情况作为纳入标准。将肝脏组织和肿瘤的自动分割结果与专家手动进行的参考标准描绘进行比较。分割准确性已通过以下评估框架进行了评估:骰子相似系数(DSC),假阴性比(FNR),假阳性比(FPR)和处理时间。关于肝脏表面,图形切割的DSC为95.49%($ {rm FPR} = 2.35%$和$ {rm FNR} = 5.10%$),而活动轮廓的DSC为96.17%($ {rm FPR} = 3.35%$和$ {rm FNR} = 3.87%$)。分析的数据集显示了52种肿瘤:图切算法检测到48种肿瘤,DSC为88.65%,而主动轮廓算法仅检测到44种肿瘤,DSC为87.10%。此外,就时间性能而言,相对于活动轮廓一,图形切割算法所需的时间更少。实施的初始化方法允许全自动分割,从而在精度和处理时间方面实现了图割算法的卓越整体性能。此处介绍的初始化方法适用于两种不同的分割技术,并且非常可靠,可以进一步扩展。

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