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Soil biochar amendment shapes the composition of N_2O-reducing microbial communities

机译:土壤生物炭改良剂影响还原N_2O的微生物群落的组成

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摘要

Soil biochar amendment has been described as a promising tool to improve soil quality, sequester carbon, and mitigate nitrous oxide (N_2O) emissions. N_2O is a potent greenhouse gas. The main sources of N_2O in soils are microbially-mediated nitrogen transformation processes such as nitrification and denitrification. While previous studies have focused on the link between N_2O emission mitigation and the abundance and activity of N_2O-reducing microorganisms in biochar-amended soils, the impact of biochar on the taxo-nomic composition of the nosZ gene carrying soil microbial community has not been subject of systematic study to date. We used 454 pyrosequencing in order to study the microbial diversity in biochar-amended and biochar-free soil microcosms. We sequenced bacterial 16S rRNA gene amplicons as well as fragments of common (typical) nosZ genes and the recently described 'atypical' nosZ genes. The aim was to describe biochar-induced shifts in general bacterial community diversity and taxonomic variations among the nosZ gene containing N_2O-reducing microbial communities. While soil biochar amendment significantly altered the 16S rRNA gene-based community composition and structure, it also led to the development of distinct functional traits capable of N_2O reduction containing typical and atypical nosZ genes related to nosZ genes found in Pseudomonas stutzeri and Pedobacter saltans, respectively. Our results showed that biochar amendment can affect the relative abundance and taxonomic composition of N_2O-reducing functional mi-crobial traits in soil. Thus these findings broaden our knowledge on the impact of biochar on soil microbial community composition and nitrogen cycling.
机译:土壤生物炭改良剂已被描述为改善土壤质量,固碳和减轻一氧化二氮(N_2O)排放的有前途的工具。 N_2O是有效的温室气体。土壤中N_2O的主要来源是微生物介导的氮转化过程,例如硝化作用和反硝化作用。虽然以前的研究集中在减轻N_2O排放与生物炭改良土壤中减少N_2O的微生物的丰度和活性之间的联系,但生物炭对携带土壤微生物群落的nosZ基因分类学组成的影响尚未受到关注。迄今为止的系统研究。为了研究生物炭改良和无生物炭的土壤微观微生物的多样性,我们使用454焦磷酸测序。我们对细菌16S rRNA基因扩增子以及常见(典型)nosZ基因和最近描述的“非典型” nosZ基因片段进行了测序。目的是描述生物炭引起的一般细菌群落多样性变化和包含减少N_2O的微生物群落的nosZ基因之间的分类学变化。虽然土壤生物炭改良剂显着改变了基于16S rRNA基因的群落组成和结构,但也导致了能够还原N_2O的独特功能性状的发展,其中包含典型和非典型的nosZ基因,分别与斯图氏假单胞菌和Pedobacter saltans中的nosZ基因相关。 。我们的结果表明,生物炭改良剂可以影响土壤中N_2O还原功能性微微生物特征的相对丰度和分类学组成。因此,这些发现拓宽了我们对生物炭对土壤微生物群落组成和氮循环的影响的认识。

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  • 来源
    《The Science of the Total Environment》 |2016年第15期|379-390|共12页
  • 作者单位

    Geomicrobiology & Microbial Ecology, Center for Applied Geosciences, University of Tuebingen, Sigwartstr. 10, 72076 Tuebingen, Germany;

    Geomicrobiology & Microbial Ecology, Center for Applied Geosciences, University of Tuebingen, Sigwartstr. 10, 72076 Tuebingen, Germany;

    Algorithms in Bioinformatics, Center for Bioinformatics, University of Tuebingen, Sand 14, 72076 Tuebingen, Germany;

    Algorithms in Bioinformatics, Center for Bioinformatics, University of Tuebingen, Sand 14, 72076 Tuebingen, Germany;

    Geomicrobiology & Microbial Ecology, Center for Applied Geosciences, University of Tuebingen, Sigwartstr. 10, 72076 Tuebingen, Germany;

    Geomicrobiology & Microbial Ecology, Center for Applied Geosciences, University of Tuebingen, Sigwartstr. 10, 72076 Tuebingen, Germany,Department of Civil Environmental, and Geo-Engineering, University of Minnesota, 500 Pillsbury Drive S.E., Minneapolis, MN 55455-0116, USA,BioTechnology Institute, 140 Gortner Labs, 1479 Gortner Avenue, St. Paul, MN 55108-6106, USA;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Nitrogen cycle; Biochar; Nitrous oxide emission; nosZ genes; Soil microbial community; 454 amplicon pyrosequencing;

    机译:氮循环;生物炭一氧化二氮排放;nosZ基因;土壤微生物群落;454扩增子焦磷酸测序;

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