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Genome-Wide Analysis of Biotin Biosynthesis in Eukaryotic Photosynthetic Algae

机译:真核生物光合藻中生物素生物合成的全基因组分析

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摘要

Biotin is a cofactor responsible for carbon dioxide transfer in several carboxylase enzymes, which play a significant role in various metabolic reactions such as fatty acid synthesis, branched chain amino acid catabolism, and gluconeogenesis. Biotin is also involved in citric acid cycle, which is the process of biochemical energy generation during aerobic respiration. Though the function of biotin in the growth of algae has been extensively investigated, little is known about the biosynthetic routes of biotin in the algal kingdom. In the present study, 44 biotin biosynthesis-related genes were identified from 14 eukaryotic photosynthetic algal genomes by BLASTP and TBLASN programs. A comprehensive analysis was performed to characterize distribution, phylogeny, structure domains, and coevolution patterns of those genes. Forty-four biotin biosynthesis-related enzymes (BBREs) were found to be distributed in three groups: 7-keto-8-aminopelargonic acid synthase, diaminopelargonic acid synthase/dethiobiotin synthetase, and biotin synthase. Structure domains were considerably conserved among the subfamilies of BBREs. The intramolecular coevolutionary sites are widely distributed in biotin synthase. The present study provides new insights into the origin and evolution of biotin biosynthetic pathways in eukaryotic photosynthetic algae. Furthermore, the characterization of biotin biosynthesis-related genes from algae will promote the identification and functional studies of BBREs.
机译:生物素是负责多种羧化酶中二氧化碳转移的辅助因子,其在各种代谢反应中发挥重要作用,例如脂肪酸合成,支链氨基酸分解代谢和糖异生。生物素也参与柠檬酸循环,柠檬酸循环是有氧呼吸过程中生化能量产生的过程。尽管已经广泛研究了生物素在藻类生长中的功能,但对于藻类王国中生物素的生物合成途径知之甚少。在本研究中,通过BLASTP和TBLASN程序从14个真核生物光合藻基因组中鉴定出44个生物素生物合成相关基因。进行了全面的分析,以表征这些基因的分布,系统发育,结构域和协同进化模式。发现有44种生物素生物合成相关酶(BBRE)分布在三组中:7-酮8-氨基壬酸合酶,二氨基壬酸合酶/脱硫生物素合成酶和生物素合酶。在BBRE的亚家族中,结构域是相当保守的。分子内协同进化位点广泛分布在生物素合酶中。本研究提供了真核生物光合藻中生物素生物合成途径的起源和进化的新见解。此外,藻类生物素生物合成相关基因的表征将促进BBRE的鉴定和功能研究。

著录项

  • 来源
    《Plant Molecular Biology Reporter》 |2012年第2期|p.421-432|共12页
  • 作者单位

    Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, People’s Republic of China;

    Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, People’s Republic of China;

    Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, People’s Republic of China;

    Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, People’s Republic of China;

    Yantai Institute of Coastal Zone Research, Chinese Academy of Sciences, Yantai, 264003, People’s Republic of China;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    Biotin biosynthesis; Molecular evolution; Coevolution; Comparative genomics; Algae;

    机译:生物素生物合成分子进化共进化比较基因组学藻类;

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