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Structural Studies of Bilirubin: Molecular Structure, Fourier Transform Infra-Red, Ultraviolet-Visible, and Vibrational Frequency Analysis

机译:胆红素的结构研究:分子结构,红外傅立叶变换,紫外可见光谱和振动频率分析

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摘要

Molecular structure, harmonic vibrational frequencies, Mulliken charges and temperature dependence of thermodynamic properties of bilirubin molecule have been investigated by Density Functional Theory (DFT) using standard B3LYP/6-311G basis set in the ground state. The Fourier Transform Infra-red (FTIR) spectrum of bilirubin in the spectral region 4000-400 cm~(-1) and its electronic absorption spectrum in the range 190-1400 nm has been recorded. The results of observed FTIR and absorption spectrum are compared with the calculated one. A good agreement between experimental and calculated vibrational frequencies has been observed. Hyper-conjugative interactions and charge delocalization have been analyzed using natural bond orbital (NBO) analysis which is responsible for the stability of the molecule. The thermodynamic properties of the bilirubin molecule at different temperatures were calculated, revealing the correlations between the standard heat capacity, standard entropy and standard enthalpy changes with temperature. The study HOMO-LUMO energy is extended to calculate the energy gap and other related molecular properties such as ionization potential, electron affinity, global hardness, electron chemical potential and global electrophilicity of bilirubin. The electrostatic potential (ESP), molecular electrostatic potential (MEP) and total electron density (ED) map of bilirubin were also studied.
机译:胆红素分子的分子结构,谐波振动频率,Mulliken电荷和热力学性质对温度的依赖性已通过使用密度为B3LYP / 6-311G的基态基态的密度泛函理论(DFT)进行了研究。记录了胆红素在4000-400 cm〜(-1)光谱区的傅立叶变换红外(FTIR)光谱及其在190-1400 nm范围内的电子吸收光谱。将观察到的FTIR和吸收光谱的结果与计算得出的结果进行比较。已经观察到实验和计算的振动频率之间的良好一致性。超共轭相互作用和电荷离域已使用天然键轨道(NBO)分析进行了分析,该分析负责分子的稳定性。计算了胆红素分子在不同温度下的热力学性质,揭示了标准热容,标准熵和标准焓随温度变化之间的关系。 HOMO-LUMO能量的研究扩展到计算能隙和其他相关分子特性,例如电离势,电子亲和力,整体硬度,电子化学势和胆红素的整体亲电性。还研究了胆红素的静电势(ESP),分子静电势(MEP)和总电子密度(ED)图。

著录项

  • 来源
    《Materials Focus》 |2016年第5期|418-429|共12页
  • 作者单位

    School of Physics, Shri Mata Vaishno Devi University, Kakryal, Katra 182320, Jammu and Kashmir, India;

    School of Physics, Shri Mata Vaishno Devi University, Kakryal, Katra 182320, Jammu and Kashmir, India;

    School of Physics, Shri Mata Vaishno Devi University, Kakryal, Katra 182320, Jammu and Kashmir, India;

    School of Physics, Shri Mata Vaishno Devi University, Kakryal, Katra 182320, Jammu and Kashmir, India;

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  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    FTIR; Density Functional Theory; NBO; HOMO-LUMO; Gaussian09;

    机译:FTIR;密度泛函理论;NBO;均质高斯09;

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