首页> 外文期刊>Malacologia >TAXONOMIC STUDY OF SHALLOW-WATER OCTOPUSES (CEPHALOPODA: OCTOPODIDAE) IN JAPAN AND ADJACENT WATERS USING MITOCHONDRIAL GENES WITH PERSPECTIVES ON OCTOPUS DNABARCODING
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TAXONOMIC STUDY OF SHALLOW-WATER OCTOPUSES (CEPHALOPODA: OCTOPODIDAE) IN JAPAN AND ADJACENT WATERS USING MITOCHONDRIAL GENES WITH PERSPECTIVES ON OCTOPUS DNABARCODING

机译:利用线粒体基因和章鱼DNA禁忌证对日本和附近水域浅水章鱼(Cephalopoda:Octopodidae)进行分类学研究

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A recent study revised the generic level taxonomy of the family Octopodidae, and several species groups that were previously included in Octopus are now recognized as independent genera. However, knowledge regarding phylogenetic relationships among taxa in the family Octopodidae is still poor. The phylogenetic relationships of shallow-water benthic octopus species in Japan and adjacent waters were examined in the present study using mitochon-drial DNA cytochrome c oxidase subunits I and III (COI and COIN, respectively) sequence data, and the taxonomic statuses of the octopus species were compared to those derived by morphological identification. We obtained COI (657 bp) and COIN (464 bp) sequences from 45 taxa assigned to 34 species of seven genera. Samples used were voucher specimens stored in the National Museum of Nature and Science, Tokyo. Sequences of the genes of both Ha-liphron atlanticus and Tremoctopus violaceus from GenBank were included as outgroup taxa. Additionally, sequences of the genes of Octopus vulgaris obtained from Mediterranean coast of France, which is type locality of this species, was also included from GenBank in order to discuss about status of Japanese O. vulgaris. Through phylogenetic analyses, we recognized Callistoctopus and a distinct group including four Octopus species and an Enteroctopus species, which was designated the "Enteroctopus group" in the present study, with high bootstrap support. Amphioctopus was not completely distinguished because it sometimes formed a clade together with Hapalochlaena, which shows morphological affinities with Amphioctopus. Abdo-pus + O. laqueus + O. cyanea and O. vulgaris + O. oliveri were recognized as distinct groups, but the phylogenetic support for these groups was weak. For identifying species using short DNA sequences, sequence divergences were calculated using COI sequences. Sequences within and among species were generally divergent enough to discriminate the species, but several overlaps with intra- and interspecific divergence caused by poor taxonomic resolution were also observed. Although performing species identification using DNA sequences from shallow-water benthic octopus species is premature, the results in this study indicated the possible application of COI sequences in octopus species identification, thereby providing a preliminary dataset for future DNA barcoding of octopus.
机译:最近的一项研究修订了章鱼科的通用分类法,并且以前包括在章鱼中的几个物种组现在被认为是独立属。但是,关于八足动物科中的类群之间的系统发育关系的知识仍然很贫乏。本研究使用线粒体DNA DNA细胞色素C氧化酶亚基I和III(分别为COI和COIN)序列数据,以及章鱼的分类状况,研究了日本和邻近水域的浅水底栖章鱼物种的系统发育关系。将这些物种与通过形态鉴定得出的物种进行比较。我们从分配给七个属的34个物种的45个分类单元中获得了COI(657 bp)和COIN(464 bp)序列。使用的样品是存储在东京国立自然科学博物馆的凭证标本。 GenBank的Ha-liphron atlanticus和Tremoctopus violaceus的基因序列均作为外群分类群包​​括在内。另外,GenBank还提供了从法国地中海沿岸获得的八达通的基因序列,该基因是该物种的类型所在地,目的是讨论日本寻常型O. gargaris的状况。通过系统发育分析,我们认识到了Callistoctopus和一个独特的群体,其中包括四个章鱼物种和一个Enteroctopus物种,在本研究中被称为“ Enteroctopus组”,并具有较高的自举支持。两栖动物并没有完全区分出来,因为它有时会与Hapalochlaena一起形成一个进化枝,显示出与两栖动物的形态亲和力。 Abdo-pus + O. laqueus + O. cyanea和O. vulgaris + O. Oliveri被认为是不同的群体,但是对这些群体的系统发育支持较弱。为了使用短DNA序列鉴定物种,使用COI序列计算了序列差异。物种内部和内部的序列通常具有足够的差异以区分物种,但也观察到由​​于分类学分辨率差而导致种内和种间差异的重叠。尽管使用来自浅水底栖章鱼物种的DNA序列进行物种鉴定还为时过早,但这项研究的结果表明,COI序列在章鱼物种鉴定中的可能应用,从而为章鱼的未来DNA条形码提供了初步的数据集。

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