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Cryptosporidium genotyping and land use mapping for hazard identification and source tracking in a small mixed rural-urban watershed in Southeastern Brazil

机译:巴西东南部小混合农村城市水域危险识别和源跟踪的密码孢子脒基因分型和土地利用测绘

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摘要

Cryptosporidium, faecal indicator organisms and physical and chemical water quality variables were monitored in a small mixed rural-urban watershed in southeastern Brazil. Cryptosporidium was present in 43% of 117 water samples analysed by microscopy. Concentrations varied from non-detects to 14 oocysts L-1. All samples were further analysed by nested-PCR, and Cryptosporidium spp. were detected in 24% (28) of them. Sequencing at the 18S rRNA locus gave high quality sequences in eight samples, revealing the presence of Cryptosporidium parvum. Cryptosporidium was not correlated with faecal indicator organisms (total coliforms, Escherichia coli, Enterococcus and coliphages), nor with physical and chemical water quality variables (e.g. turbidity, electrical conductivity and chemical oxygen demand), but it was with farm animal density (number of animals per ha). Land use mapping reinforced the suggestions from Cryptosporidium genotyping that both animals (livestock) and humans are potential sources to environmental contamination with oocysts within the watershed.
机译:在巴西东南部的小型混合的农村城市分水岭中监测粪便孢子虫,粪便指示器生物和物理和化学水质变量。通过显微镜分析的117个水样中的43%占117个水样的33%。浓度因非检测到14个卵囊L-1而变化。通过巢式PCR和Cryptosporidium SPP进一步分析所有样品。在其中24%(28)中被检测到。在18S rRNA座位的测序在八个样品中进行了高质量的序列,揭示了PruptoSidium parvum的存在。隐孢子虫与粪便指示器生物(总大肠杆菌,大肠杆菌,肠球菌和COLIPHAGE)不相关,也没有物理和化学水质变量(例如浊度,导电性和化学需氧量),但它与农场动物密度(数量)动物每只公顷)。土地利用映射加强了隐孢子虫基因分型的建议,即动物(牲畜)和人类是与流域内的卵囊环境污染的潜在来源。

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