Remarkable Rigidity of the Single a-Helical Domain of Myosin-VI As Revealed by NMR Spectroscopy

摘要

Although the alpha-helix has long been recognized as an all-important element of secondary structure, it generally requires stabilization by tertiary interactions with other parts of a protein's structure. Highly charged single alpha-helical (SAH) domains, consisting of a high percentage (75%) of Arg, Lys, and Glu residues, are exceptions to this rule but have been difficult to characterize structurally. Our study focuses on the 68-residue medial tail domain of myosin-VI, which is found to contain a highly ordered alpha-helical structure extending from Glu-6 to Lys-63. High hydrogen exchange protection factors (15-150), small (ca. 4 Hz) (3)J(HNH alpha) couplings, and a near-perfect fit to an ideal model alpha-helix for its residual dipolar couplings (RDCs), measured in a filamentous phage medium, support the high regularity of this helix. Remarkably, the hydrogen exchange rates are far more homogeneous protection factors derived from them, suggesting that for these transiently broken helices the intrinsic exchange rates derived from the amino acid sequence are not appropriate reference values. N-15 relaxation data indicate a very high degree of rotational diffusion anisotropy (D-parallel to/D-perpendicular to approximate to 7.6), consistent with the hydrodynamic behavior predicted for such a long, nearly straight alpha-helix. Alignment of the helix by a paramagnetic lanthanide ion attached to its N-terminal region shows a decrease in alignment as the distance from the tagging site increases. This decrease yields a precise measure for the persistence length of 224 +/- 10 angstrom at 20 degrees C, supporting the idea that the role of the SAH helix is to act as an extension of the myosin-VI lever arm.