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Uncovering Molecular Details of Urea Crystal Growth in the Presence of Additives

机译:在添加剂存在下揭示尿素晶体生长的分子细节

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摘要

Controlling the shape of crystals is of great practical relevance in fields like pharmacology and fine chemistry. Here we examine the paradigmatic case of urea which is known to crystallize from water with a needle-like morphology. To prevent this undesired effect, inhibitors that selectively favor or discourage the growth of specific crystal faces can be used. In urea the most relevant faces are the {001} and the {110} which are known to grow fast and slow, respectively. The relevant growth speed difference between these two crystal faces is responsible for the needle-like structure of crystals grown in water solution. To prevent this effect, additives are used to slow down the growth of one face relative to another, thus controlling the shape of the crystal. We study the growth of fast {001} and slow {110} faces in water solution and the effect of shape controlling inhibitors like biuret. Extensive sampling through molecular dynamics simulations provides a microscopic picture of the growth mechanism and of the role of the additives. We find a continuous growth mechanism on the {001} face, while the slow growing {110} face evolves through a birth and spread process, in which the rate-determining step is the formation on the surface of a two-dimensional crystalline nucleus. On the {001} face, growth inhibitors like biuret compete with urea for the adsorption on surface lattice sites; on the {110} face instead additives cannot interact specifically with surface sites and play a marginal sterical hindrance of the crystal growth. The free energies of adsorption of additives and urea are evaluated with advanced simulation methods (well-tempered metadynamics) allowing a microscopic understanding of the selective effect of additives. Based on this case study, general principles for the understanding of the anisotropic growth of molecular crystals from solutions are laid out. Our work is a step toward a rational development of novel shape-affecting additives.
机译:在诸如药理学和精细化学的领域中,控制晶体的形状具有很大的实际意义。在这里,我们研究了尿素的典型案例,该案例已知是从水中以针状形态结晶的。为了防止这种不良作用,可以使用选择性地促进或阻止特定晶面生长的抑制剂。在尿素中,最相关的面是{001}和{110},已知它们分别快速增长和缓慢增长。这两个晶体面之间的相关生长速度差异是在水溶液中生长的晶体的针状结构的原因。为了防止这种影响,使用添加剂来减慢一个面相对于另一个面的生长,从而控制晶体的形状。我们研究了快速{001}和慢速{110}面在水溶液中的生长以及形状控制抑制剂(如缩二脲)的作用。通过分子动力学模拟进行的大量采样提供了生长机理和添加剂作用的微观图像。我们发现{001}面上有一个连续的增长机制,而缓慢增长的{110}面则通过出生和扩散过程演化,其中决定速率的步骤是在二维晶核表面上形成。在{001}面上,生长抑制剂(如缩二脲)与尿素竞争,以吸附在表面晶格部位上。相反,在{110}面上的添加剂不能与表面位点特异性相互作用,并且不能起到晶体生长的边际空间障碍的作用。添加剂和尿素的吸附自由能通过先进的模拟方法(合理的动力学)进行评估,从而可以微观地了解添加剂的选择性作用。在此案例研究的基础上,提出了从溶液中理解分子晶体各向异性生长的一般原理。我们的工作是朝着合理开发影响形状的新型添加剂迈出的一步。

著录项

  • 来源
    《Journal of the American Chemical Society》 |2012年第41期|p.17221-17233|共13页
  • 作者单位

    Institute of Process Engineering, ETH Zurich, CH-8092 Zurich, Switzerland,Department of Chemistry and Applied Biosciences, ETH Zurich, Zurich, Switzerland;

    Institute of Process Engineering, ETH Zurich, CH-8092 Zurich, Switzerland;

    Department of Chemistry and Applied Biosciences, ETH Zurich, Zurich, Switzerland;

    Institute of Process Engineering, ETH Zurich, CH-8092 Zurich, Switzerland;

    Department of Chemistry and Applied Biosciences, ETH Zurich, Zurich, Switzerland,Facolta di Informatica, Istituto di Scienze Computazionali, Universita della Svizzera Italiana Via G. Buffi 13, 6900 Lugano Switzerland;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
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  • 入库时间 2022-08-18 03:13:37

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