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Flip-Flop of Steroids in Phospholipid Bilayers: Effects of the Chemical Structure on Transbilayer Diffusion

机译:磷脂双层中类固醇的触发器:化学结构对双分子层扩散的影响。

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摘要

The transverse motion of molecules from one leaflet to the other of a lipid bilayer, or flip-flop, represents a putative mechanism for their transmembrane transport and may contribute to the asymmetric distribution of components in biomembranes. However, a clear understanding of this process is still missing. The scarce knowledge derives from the difficulty of experimental determination. Because of its slow rate on the molecular time scale, flip-flop is challenging also for computational techniques. Here, we report a study of the passive transbilayer diffusion of steroids, based on a kinetic model derived from the analysis of their free energy surface, as a function of their position and orientation in the bilayer. An implicit membrane description is used, where the anisotropy and the nonuniformity of the bilayer environment are taken into account in terms of the gradients of density, dielectric permittivity, acyl chain order parameters, and lateral pressure. The flip-flop rates are determined by solving the Master Equation that governs the time evolution of the system, with transition rates between free energy minima evaluated according to the Kramers theory. Considering various steroids (cholesterol, lanosterol, ketosterone, 5-cholestene, 25-hydroxycholesterol, and testosterone), we can discuss how differences in molecular shape and polarity affect the pathway and the rate of flip-flop in a liquid crystalline 1,2-dipalmitoyl-sn-glycero-3-phosphatidylcholine (DPPC) bilayer, at low steroid concentration. We predict time scales ranging from microseconds to milliseconds, strongly affected by the presence of polar substituents and by their position in the molecular skeleton.
机译:分子从脂质小分子的一个瓣叶到另一个瓣膜的另一瓣的横向运动代表了其跨膜转运的假定机制,并且可能导致生物膜中组分的不对称分布。但是,仍然缺少对该过程的清晰理解。稀缺的知识源于实验确定的困难。由于其在分子时间尺度上的缓慢速率,因此触发器对计算技术也具有挑战性。在这里,我们报告了基于类固醇的自由能表面分析的动力学模型作为类固醇在双层中的位置和取向的函数,对类固醇的被动双分子层扩散进行了研究。使用隐式膜描述,其中根据密度,介电常数,酰基链顺序参数和侧压力的梯度考虑了双层环境的各向异性和不均匀性。触发器速率是通过求解控制系统时间演化的主方程确定的,自由能最小值之间的转换率根据Kramers理论进行评估。考虑到各种类固醇(胆固醇,羊毛甾醇,酮固酮,5-胆固醇,25-羟基胆固醇和睾丸激素),我们可以讨论分子形状和极性的差异如何影响液晶1,2中的触发途径和触发率在低类固醇浓度下,双棕榈酰-sn-甘油-3-磷脂酰胆碱(DPPC)双层。我们预测时间范围从微秒到毫秒,受极性取代基的存在及其在分子骨架中的位置的影响很大。

著录项

  • 来源
    《Journal of the American Chemical Society》 |2012年第29期|p.12198-12208|共11页
  • 作者单位

    Department of Chemical Sciences, University of Padova, Via Marzolo 1, 35131 Padova, Italy;

    Center for Biological Sequence Analysis, Department of Systems Biology, Technical University of Denmark, Kemitorvet, Building 208, 2800 Kgs. Lyngby, Denmark;

    Department of Chemical Sciences, University of Padova, Via Marzolo 1, 35131 Padova, Italy;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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  • 正文语种 eng
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