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Calibration of single-cell model parameters based on membrane resistance improves the accuracy of cardiac tissue simulations

机译:基于膜电阻的单电池模型参数的校准提高了心脏组织模拟的准确性

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摘要

In the calibration process, replicating some cellular properties is the main focus, while the importance of membrane resistance (Rm) that is primal in the tissue-level modeling is often underestimated. Previously, we presented a framework in which Rm in addition to action potential (AP) waveform was considered in the cellular model fitting. In this paper, we test the hypothesis that this approach for tuning cellular model parameters improves the accuracy of simulations at the tissue level. In doing so, two different sets of single-cell models are generated via independent realizations of our multi-objective optimization approach. In the first set of calibration (Model I), root-mean-square error (RMSE) of AP, and absolute error (AE) of maximum upstroke velocity are included as optimization functions; however, in the second set of calibration (Model II), RMSE of Rm curve in the repolarization phase is also added to the optimization functions. The calibrated cell models are then used in several tissue configurations of physiological relevance. We adopt well-defined evaluation metrics to compare tissue models tuned using Models I and II. In the source-sink mismatch configuration, the average absolute relative error (ARE) of the critical transition border, defined as the smallest required window width between source and sink for AP propagation, is less than 4.7 % in Model II, while this error is increased to more than 8.9 % in Model I. In addition, in Model I, the average ARE of total time for activation of tissue is 3.3 & ndash;6.3 %; however, in Model II, this error is reduced to 0.7 & ndash;1.6 %. In the Purkinje-myocardium configuration, the average of RMSE of activation time map is reduced approximately 75 % in Model II. Finally, in the transmural APD heterogeneity configuration, the average AREs of AP duration (APD) and APD dispersion (i.e., the difference between maximum and minimum of APD) are about 13.2 % and 17.4 % in Model I and 5.8 % and 6.8 % in Model II, respectively. Overall, our results demonstrate that consideration of Rm in the single-cell optimization procedure yields a substantial improvement in the accuracy of tissue models.
机译:在校准过程中,复制一些细胞性质是主要焦点,而在组织级模型中引起的膜电阻(RM)的重要性通常被低估。以前,我们介绍了一个框架,其中在蜂窝模型配件中考虑了除了动作电位(AP)波形之外的RM。在本文中,我们测试了这种调整蜂窝模型参数的方法的假设提高了组织水平的模拟的准确性。在这样做时,通过我们的多目标优化方法的独立实现生成两组不同的单细胞模型。在第一组校准(模型I)中,AP的根均方误差(RMSE)和最大上调速度的绝对误差(AE)作为优化功能;然而,在第二组校准(模型II)中,还将重对阶段中的RM曲线的RMSE添加到优化函数中。然后在生理相关性的几种组织配置中使用校准的细胞模型。我们采用明确定义的评估指标来比较使用模型I和II调整的组织模型。在源区间不匹配配置中,临界转换边界的平均绝对相对误差(AS)定义为AP传播的源极和接收器之间最小的所需窗口宽度,在模型II中小于4.7%,而此错误是在模型中增加到8.9%以上。此外,在模型I中,平均值为组织激活的总时间为3.3– 6.3%;但是,在II模型中,该误差减少到0.7– 1.6%。在Purkinje-Myocardium配置中,II模型II中的激活时间映射的平均RMSE的平均值减少了大约75%。最后,在透跨异质性配置中,AP持续时间(APD)和APD分散的平均ARES(即,最大值和最小值之间的差异)在I模型I和5.8%和6.8%中为约13.2%和17.4%模型II分别。总体而言,我们的结果表明,在单细胞优化过程中考虑RM的考虑会产生显着提高组织模型的准确性。

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