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Correlation mapping: rapid method for identification of histological features and pathological classification in mid infrared spectroscopic images of lymph nodes

机译:相关映射:快速识别淋巴结中红外光谱图像的组织学特征和病理学分类的方法

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摘要

In this work, a novel technique for rapid image analysis of Fourier transform infrared (FTIR) data obtained from human lymph nodes is explored. It uses the mathematical principle of orthogonality as a method to quickly and efficiently obtain tissue and pathology information from a spectral image cube. It requires less computational power and time compared to most forms of cluster analysis. The values obtained from different tissue and pathology types allows for discrimination of noncancerous from cancerous lymph nodes. It involves the calculation of the dot product between reference spectra and individual spectra from across the tissue image. These provide a measure of the correlation between individual spectra and the reference spectra, and each spectrum or pixel in the image is given a color representing the reference most closely correlating with it. The correlation maps are validated with the tissue and pathology features identified by an expert pathologist from corresponding hematoxylin and eosin stained tissue sections. Although this novel technique requires further study to properly test and validate this tool, with inclusion of more lymph node hyperspectral datasets (containing a greater variety of tissue states), it demonstrates significant clinical potential for pathology diagnosis.
机译:在这项工作中,探索了一种从人淋巴结获得的傅立叶变换红外(FTIR)数据快速图像分析的新技术。它使用正交性的数学原理作为一种从光谱图像立方体中快速有效地获取组织和病理信息的方法。与大多数形式的聚类分析相比,它需要较少的计算能力和时间。从不同的组织和病理学类型获得的值可以区分癌淋巴结中的非癌性。它涉及计算整个组织图像中参考光谱和单个光谱之间的点积。这些提供了单个光谱与参考光谱之间的相关性的度量,并且图像中的每个光谱或像素都被赋予了一种颜色,该颜色表示与之最相关的参考。用专家病理学家从苏木精和曙红染色的组织切片中鉴定出的组织和病理学特征验证相关图。尽管这项新技术需要进一步研究以正确测试和验证此工具,并包含更多淋巴结高光谱数据集(包含更多种组织状态),但它仍显示出病理学诊断的重大临床潜力。

著录项

  • 来源
    《Journal of biomedical optics》 |2010年第2期|p.026030.1-026030.5|共5页
  • 作者单位

    Cranfield Health Gloucestershire Hospitals NHS Foundation Trust Biophotonics Research Croup Gloucester, GL1 3NN United Kingdom;

    Cranfield University Department of Material and Medical Sciences Shrivenham Campus, Swindon Wiltshire, SN6 8LA United Kingdom;

    Cranfield Health Gloucestershire Hospitals NHS Foundation Trust Biophotonics Research Group Gloucester, GL1 3NN United Kingdom;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    correlation mapping; FTIR spectroscopy; lymph node; spectral imaging; orthogonality; colinearity; cancer;

    机译:相关映射FTIR光谱;淋巴结;光谱成像正交性共线性癌症;

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