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Classification of Mycobacterium tuberculosis in Images of ZN-Stained Sputum Smears

机译:ZN染色痰涂片图像中结核分枝杆菌的分类

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摘要

Screening for tuberculosis (TB) in low- and middle-income countries is centered on the microscope. We present methods for the automated identification of Mycobacterium tuberculosis in images of Ziehl–Neelsen (ZN) stained sputum smears obtained using a bright-field microscope. We segment candidate bacillus objects using a combination of two-class pixel classifiers. The algorithm produces results that agree well with manual segmentations, as judged by the Hausdorff distance and the modified Williams index. The extraction of geometric-transformation-invariant features and optimization of the feature set by feature subset selection and Fisher transformation follow. Finally, different two-class object classifiers are compared. The sensitivity and specificity of all tested classifiers is above 95% for the identification of bacillus objects represented by Fisher-transformed features. Our results may be used to reduce technician involvement in screening for TB, and would be particularly useful in laboratories in countries with a high burden of TB, where, typically, ZN rather than auramine staining of sputum smears is the method of choice.
机译:在中低收入国家/地区进行结核病(TB)筛查的重点是显微镜。我们在使用明场显微镜获得的Ziehl–Neelsen(ZN)染色痰涂片图像中,提供了自动鉴定结核分枝杆菌的方法。我们使用两类像素分类器的组合来分割候选芽孢杆菌对象。通过Hausdorff距离和修正的Williams指数判断,该算法产生的结果与手动分割非常吻合。接下来是通过特征子集选择和Fisher变换提取几何变换不变特征并优化特征集。最后,比较了不同的两类对象分类器。所有测试的分类器对费舍尔变换特征所代表的芽孢杆菌对象的识别灵敏度和特异性均高于95%。我们的研究结果可用于减少技术人员参与结核病筛查的情况,在结核病高负担国家的实验室中尤其有用,在这些实验室中,通常首选ZN而不是对痰涂片进行金黄色胺染色。

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