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Application of dHPLC for Mutation Detection of the Fibrillin-1 Gene for the Diagnosis of Marfan Syndrome in a National Health Service Laboratory

机译:dHPLC在Fibrillin-1基因突变检测中在国家卫生服务实验室诊断Marfan综合征中的应用

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摘要

Marfan syndrome (MFS) is an autosomal dominant connective tissue disorder caused by mutations in the fib-rillin-1 gene FBN1. Mutation detection of this 65-exon gene presents a particular challenge for the diagnostic service in cost, time constraints, and the need to maintain a stringently optimized assay procedure. Using denaturing high-performance liquid chromatography (dHPLC), we have designed a procedure for rapid mutation scanning, redesigning 50% of published primer sets, screening by Ensembl to avoid inclusion of polymorphic variations and employing a limited set of PCR conditions to allow for a high-throughput 96-well format. We have screened 262 unrelated patients with MFS or Marfan-like phenotypes and detected 103 (39.3%) mutations including 93 different mutations, 72 of which are novel. The mutations include 55 missense (53.4%) 19 splice site (18.5%), 17 frameshift (16.5%), 11 nonsense (10.7%) and 1 in-frame deletion/insertion.
机译:Marfan综合征(MFS)是由fib-rillin-1基因FBN1突变引起的常染色体显性结缔组织疾病。此65外显子基因的突变检测在成本,时间限制以及维持严格优化的测定程序方面,对诊断服务提出了特殊的挑战。我们使用变性高效液相色谱(dHPLC)设计了一种程序,用于快速突变扫描,重新设计50%已发表的引物集,通过Ensembl进行筛选以避免多态性变异的发生,并采用有限的PCR条件设置以允许高通量96孔格式。我们筛选了262名无相关性的MFS或Marfan样表型患者,并检测到103个突变(占39.3%),包括93个不同的突变,其中72个是新突变。突变包括55个错义(53.4%),19个剪接位点(18.5%),17个移码(16.5%),11个无义(10.7%)和1个框内缺失/插入。

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