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Characteristic Molecular Signature for Early Detection and Prediction of Persistent Organic Pollutants in Rat Liver

机译:早期检测和预测大鼠肝脏中持久性有机污染物的特征性分子标记

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摘要

Persistent organic pollutants (POPs) are degradation-resistant anthropogenic chemicals that accumulate in the food chain and in adipose tissue, and are among the most hazardous compounds ever synthesized. However, their toxic mechanisms are still undefined. To investigate whether characteristic molecular signatures can discriminate individual POP and provide prediction markers for the early detection of POPs exposure in an animal model, we performed transcriptomic analysis of rat liver tissues after exposure to POPs. The six different POPs (toxaphene, hexachlorobenzene, chlordane, mirex, dieldrin, and heptachlor) were administered to 11-week-old male Sprague-Dawley rats, and after 48 h of exposure, RNAs were extracted from liver tissues and subjected to rat whole genome expression microarrays. Early during exposure, conventional toxicological analysis including changes in the body and organ weight, histopathological examination, and blood biochemical analysis did not reflect any toxicant stresses. However, unsupervised gene expression analysis of rat liver tissues revealed in a characteristic molecular signature for each toxicant, and supervised analysis identified 2708 outlier genes that discerned the POPs exposure group from the vehicle-treated control. Combination analysis of two different multidassifications suggested 384 genes as early detection markers for predicting each POP exposure with 100% accuracy. The data from large-scale gene expression analysis of a different POP exposure in rat model suggest that characteristic expression profiles exist in liver hepatic cells and multidassification of POP-specific molecular signatures can discriminate each toxicant at an early exposure time. The use of these molecular markers may be more widely implemented in combination with more traditional techniques for assessment and prediction of toxicity exposure to POPs from an environmental aspect.
机译:持久性有机污染物(POPs)是抗降解的人为化学物质,会积聚在食物链和脂肪组织中,并且是有史以来合成的最危险的化合物之一。但是,它们的毒性机理仍未确定。为了研究特征性分子标记是否可以区分单个POP并为动物模型中的POPs暴露的早期检测提供预测标记,我们在暴露于POPs后对大鼠肝脏组织进行了转录组学分析。对11周龄的雄性Sprague-Dawley大鼠给予六种不同的POPs(毒杀芬,六氯苯,氯丹,灭蚁灵,狄氏剂和七氯),在暴露48小时后,从肝脏组织中提取RNA,并对其进行完整处理。基因组表达微阵列。在接触的早期,常规的毒理学分析(包括体重和器官重量的变化,组织病理学检查以及血液生化分析)没有反映出任何有毒的应激反应。但是,大鼠肝组织的无监督基因表达分析显示了每种有毒物质的特征性分子特征,并且有监督的分析确定了2708个离群基因,它们从媒介物处理的对照组中区分出POPs暴露组。两种不同的多重鉴定的组合分析表明,有384个基因作为早期检测标记,可以100%准确地预测每次POP暴露。来自不同POP暴露在大鼠模型中的大规模基因表达分析数据表明,肝肝细胞中存在特征性表达谱,POP特异性分子标记的多脱色可以在早期暴露时区分每种有毒物质。这些分子标记的使用可以与更传统的技术结合起来,从环境角度更广泛地用于评估和预测POPs的毒性暴露。

著录项

  • 来源
    《Environmental Science & Technology》 |2012年第23期|12882-12889|共8页
  • 作者单位

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

    Department of Pathology, College of Medicine and Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea,Functional RNomics Research Center, The Catholic University of Korea, Seoul, South Korea;

  • 收录信息 美国《科学引文索引》(SCI);美国《工程索引》(EI);美国《生物学医学文摘》(MEDLINE);美国《化学文摘》(CA);
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