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Identification of Minimal Promoter and Genetic Variants of Kruppel-like Factor 11 Gene and Association Analysis with Type 2 Diabetes in Japanese

机译:日本人Kruppel样因子11基因的最小启动子和遗传变异的鉴定以及与2型糖尿病的关联分析

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摘要

Genetic analysis of the KLF11 gene revealed two rare variants, A347S and T220M, segregating in families with early-onset type 2 diabetes, and one frequent polymorphic Q62R variant significantly associated with type 2 diabetes in Northern Europeans. Furthermore, it has been reported that over-expression of KLF11 has a deleterious effect on insulin promoter activity. Thus, an altered expression level of KLF11 may contribute to the occurrence of type 2 diabetes. To investigate the contribution of KLF11 to type 2 diabetes in Japanese, we surveyed the 5' flanking region of KLF11 by reporter assay and identified the minimal promoter region of the gene. The promoter region from -250 to +162 bp including five Sp1 binding sites showed basal promoter activity both in MIN6-m9 and HepG2 cells. We also examined the entire region of KLF11 to detect genetic variants. A total of 19 polymorphisms, six of which are novel, were identified, but none of them showed association with the occurrence of type 2 diabetes. Two of the identified polymorphisms, R29Q and S124F, are novel coding variants. Functional analyses of these variants were performed, and similarly reduced effects on transcriptional activities of insulin, catalasel, and the Smad7 gene were found. We conclude that variants of KLF11 are not a major factor in the occurrence of type 2 diabetes in Japanese. The promoter region of KLF11 identified in the present study should be useful in further elucidation of the transcriptional regulation mechanism of the gene and genetic analyses of type 2 diabetes.
机译:对KLF11基因的遗传分析显示,在北欧2型糖尿病家族中,两个罕见的变体A347S和T220M处于隔离状态,而一个频繁出现的多态性Q62R变体与2型糖尿病显着相关。此外,据报道,KLF11的过表达对胰岛素启动子活性具有有害作用。因此,KLF11表达水平的改变可能会导致2型糖尿病的发生。为了研究日语中KLF11对2型糖尿病的贡献,我们通过报告基因分析法调查了KLF11的5'侧翼区域,并确定了该基因的最小启动子区域。从-250到+162 bp的启动子区域(包括五个Sp1结合位点)在MIN6-m9和HepG2细胞中均显示了基础启动子活性。我们还检查了KLF11的整个区域,以检测遗传变异。总共鉴定出19个多态性,其中6个是新奇的,但没有一个显示出与2型糖尿病的发生有关。鉴定出的两个多态性R29Q和S124F是新颖的编码变体。进行了这些变体的功能分析,并发现类似地降低了对胰岛素,catalasel和Smad7基因的转录活性的影响。我们得出结论,KLF11的变体不是日本人2型糖尿病发生的主要因素。在本研究中确定的KLF11启动子区域应有助于进一步阐明该基因的转录调控机制和2型糖尿病的遗传分析。

著录项

  • 来源
    《Endocrine journal》 |2009年第2期|275-286|共12页
  • 作者单位

    Department of Diabetes and Endocrinology Division of Molecule and Structure, Gifu University School of Medicine, Gifu, Japan;

    Department of Diabetes and Endocrinology Division of Molecule and Structure, Gifu University School of Medicine, Gifu, Japan Laboratory of Medical Genomics, Biosignal Genome Resource Center, Institute for Molecular and Cellular Regulation, Gunma University, Maebashi, Japan;

    Department of Diabetes and Endocrinology Division of Molecule and Structure, Gifu University School of Medicine, Gifu, Japan;

    Department of Internal Medicine, Fujita Health University School of Medicine, Aichi, Japan;

    Department of Diabetes and Endocrinology Division of Molecule and Structure, Gifu University School of Medicine, Gifu, Japan;

    Laboratory of Medical Genomics, Biosignal Genome Resource Center, Institute for Molecular and Cellular Regulation, Gunma University, Maebashi, Japan;

    Department of Diabetes and Endocrinology Division of Molecule and Structure, Gifu University School of Medicine, Gifu, Japan;

  • 收录信息 美国《科学引文索引》(SCI);美国《化学文摘》(CA);
  • 原文格式 PDF
  • 正文语种 eng
  • 中图分类
  • 关键词

    KLF11; SNP; association study; promoter; type 2 diabetes;

    机译:KLF11;SNP;关联研究;发起人2型糖尿病;
  • 入库时间 2022-08-18 01:33:43

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