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首页> 外文期刊>Ecological research >Population genetic structure of Sorex unguiculatus and Sorex caecutiens (Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism
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Population genetic structure of Sorex unguiculatus and Sorex caecutiens (Soricidae, Mammalia) in Hokkaido, based on microsatellite DNA polymorphism

机译:基于微卫星DNA多态性的北海Sorex unguiculatus和Sorex caecutiens(Soricidae,Mammalia)的种群遗传结构

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We investigated the genetic structure of Sorex unguiculatus and Sorex caecutiens populations in Hokkaido, Japan, using hypervariable microsatellite DNA markers. We used five microsatellite loci to type 475 S. unguiculatus individuals from 20 localities on the Hokkaido mainland and four localities from each of four offshore islands (and 11 shrews from one locality in southern Sakhalin for a particular analysis). We used six microsatellite loci to type 240 S. caecutiens individuals from 13 localities on the Hokkaido mainland. Genetic variation was high in mainland populations of both species and low in the island populations of S. unguiculatus. Allelic richness and island size were positively correlated for S. unguiculatus, suggesting that genetic drift occurred on those islands due to small population size. In addition, four insular populations of S. unguiculatus were genetically differentiated from the mainland populations, although clear phylogeographic clustering was not confirmed among populations on the Hokkaido mainland for either S. unguiculatus or S. caecutiens. Heterozygosity excess was observed in more than half of the populations including the mainland populations of the two species, suggesting recent bottleneck events in these populations. Population dynamics of the shrews might be explained by a metapopulation scheme. According to autocorrelation analysis, the extent of non-random spatial genetic structure was approximately 100 km. Isolation by distance was observed in S. unguiculatus, but not in S. caecutiens although there is a positive trend. The lack of correlation for S. caecutiens might have been due to small sample size. Thus, no obvious differences in population genetic structure were found between the two species on the Hokkaido mainland in the present study, while previous investigations using mitochondrial DNA sequences inferred that these two species might have rather different biogeographic histories.
机译:我们使用高变微卫星DNA标记调查了日本北海道的Sorex unguiculatus和Sorex caecutiens种群的遗传结构。我们使用了五个微卫星基因座,分别对来自北海道大陆20个地区和来自四个近海岛屿的每个地区的4个地区的475 S. unguiculatus类型个体(以及来自萨哈林南部一个地区的11个sh进行特定分析)。我们使用了六个微卫星基因座,对来自北海道大陆13个地区的240名链球菌进行了鉴定。两种物种在大陆种群中的遗传变异都很高,而在孤岛链球菌中,岛屿种群的遗传变异却很低。 Unguiculatus的等位基因丰富度和岛屿大小呈正相关,这表明由于人口规模较小,这些岛屿上发生了遗传漂移。此外,尽管在北海道大陆上未发现链纹葡萄球菌或赤道葡萄球菌,但在岛上有四个孤岛链球菌在遗传上与大陆种群不同,尽管没有明确的系统地理学聚类。在超过一半的种群中都发现了杂合度过剩,包括两种物种的大陆种群,这表明这些种群中最近出现了瓶颈事件。 rew的种群动态可以通过一个种群分布方案来解释。根据自相关分析,非随机空间遗传结构的范围约为100 km。尽管存在积极的趋势,但在无刺链球菌中观察到了按距离隔离,而在链球菌中则没有。葡萄球菌缺乏相关性可能是由于样本量小。因此,在本研究中,在北海道大陆上的两个物种之间没有发现种群遗传结构的明显差异,而先前使用线粒体DNA序列进行的研究推断这两个物种可能具有不同的生物地理历史。

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