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首页> 外文期刊>Frontiers in Molecular Biosciences >Development and Validation of a Prognostic Classifier Based on Lipid Metabolism–Related Genes in Gastric Cancer
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Development and Validation of a Prognostic Classifier Based on Lipid Metabolism–Related Genes in Gastric Cancer

机译:基于胃癌脂质代谢相关基因的预后分类剂的开发与验证

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Background Dysregulation of lipid metabolism plays important roles in the tumorigenesis and progression of gastric cancer (GC). The present study aimed to establish a prognostic model based on the lipid metabolism-related genes in GC patients. Materials and Methods Two GC datasets from the Gene Expression Atlas, GSE62254 (n=300) and GSE26942 (n=217) were used as training and validation cohorts to establish a risk predictive scoring model. The efficacy of this model was assessed by ROC analysis. The association of the risk predictive scores with patient characteristics and immune cell subtypes were evaluated. A nomogram was constructed based on the risk predictive score model and other prognostic factors. Results A 19-gene risk predictive score model was established based on the expression of lipid metabolism-related genes. The time-dependent ROC analysis revealed that the risk predictive score model is stable and robust. Patients with high risk scores had significantly unfavorable overall survival compared with those with low risk scores in both the training and validation cohorts. A high risk score was associated with aggressive features, including a high tumor grade, an advanced TNM stage, and diffuse type of Lauren classification of GC. Moreover, distinct immune cell subtypes and signaling pathways were found between the high- and low risk score groups. A nomogram containing patients’ age, tumor stage, adjuvant chemotherapy, and the risk predictive score could accurately predict the survival of patients at 1 year, 3 years, and 5 years. Conclusions A novel 19-gene risk predictive score model was developed based on the lipid metabolism-related genes, which could be a potential prognostic indicator and therapeutic targets of GC.
机译:脂质代谢的背景失调在胃癌(GC)的肿瘤发生和进展中起重要作用。本研究旨在建立基于GC患者的脂质代谢相关基因的预后模型。材料和方法从基因表达AtLAS,GSE62254(n = 300)和GSE26942(n = 217)中的两个GC数据集被用作培训和验证队列,以建立风险预测评分模型。通过ROC分析评估该模型的功效。评估风险预测评分与患者特征和免疫细胞亚型的关联。基于风险预测得分模型和其他预后因素构建了一个纳米图。结果基于脂质代谢相关基因的表达建立了19-基因风险预测分数模型。时间依赖的ROC分析表明,风险预测得分模型是稳定和稳健的。风险评分高的患者与培训和验证队列风险得分低的人相比,整体存活率显着不利。高风险评分与侵蚀性特征有关,包括高肿瘤级,先进的TNM阶段和GC的Lauren分类的漫反射类型。此外,在高风险得分组之间发现了不同的免疫细胞亚型和信号通路。含有患者年龄,肿瘤阶段,佐剂化疗的载体,风险预测得分可以准确地预测1年,3年和5年的患者的存活率。结论基于脂质代谢相关基因开发了一种新型的19-基因风险预测分数模型,这可能是GC的潜在预后指标和治疗靶标。

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