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The association between poverty and gene expression within peripheral blood mononuclear cells in a diverse Baltimore City cohort

机译:不同巴尔的摩城市队列中外周血单核细胞贫困与基因表达的关系

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Socioeconomic status (SES), living in poverty, and other social determinants of health contribute to health disparities in the United States. African American (AA) men living below poverty in Baltimore City have a higher incidence of mortality when compared to either white males or AA females living below poverty. Previous studies in our laboratory and elsewhere suggest that environmental conditions are associated with differential gene expression (DGE) patterns in peripheral blood mononuclear cells (PBMCs). DGE have also been associated with hypertension and cardiovascular disease (CVD) and correlate with race and sex. However, no studies have investigated how poverty status associates with DGE between male and female AAs and whites living in Baltimore City. We examined DGE in 52 AA and white participants of the Healthy Aging in Neighborhoods of Diversity across the Life Span (HANDLS) cohort, who were living above or below 125% of the 2004 federal poverty line at time of sample collection. We performed a microarray to assess DGE patterns in PBMCs from these participants. AA males and females living in poverty had the most genes differentially-expressed compared with above poverty controls. Gene ontology (GO) analysis identified unique and overlapping pathways related to the endosome, single-stranded RNA binding, long-chain fatty-acyl-CoA biosynthesis, toll-like receptor signaling, and others within AA males and females living in poverty and compared with their above poverty controls. We performed RT-qPCR to validate top differentially-expressed genes in AA males. We found that KLF6 , DUSP2 , RBM34 , and CD19 are expressed at significantly lower levels in AA males in poverty and KCTD12 is higher compared to above poverty controls. This study serves as an additional link to better understand the gene expression response in peripheral blood mononuclear cells in those living in poverty.
机译:生活在贫困的社会经济地位(SES)以及其他健康的其他社会决定因素有助于美国的健康差异。与白人男性或生活在贫困之低的白人男性或AA女性相比,非洲裔美国人(AA)的人有更高的死亡率。我们实验室和其他地方的先前研究表明,环境条件与外周血单核细胞(PBMC)中的差异基因表达(DGE)模式相关。 DGE也与高血压和心血管疾病(CVD)有关,与种族和性别相关联。然而,没有研究过贫困地位如何与留在巴尔的摩市的男性和女性AA和白人之间的建立关系。我们在生活跨度(Handls)Cohort的多样性附近的52 AA和白人参与者中审查了DGE,他们生活在2004年的2004年联邦贫困线的125%以上或低于2004年联邦贫困线的125%。我们执行了一个微阵列,以评估来自这些参与者的PBMC中的DGE模式。与高于贫困对照相比,患有贫困的男性和女性患有差异表达的基因。基因本体(GO)分析确定了与内体,单链RNA结合,长链脂肪酰基-COA生物合成,长链脂肪酰基-COA生物合成,令人伤害的受体信号传导以及居住在贫困中的女性中的其他人的独特和重叠途径。他们以上贫困控制。我们进行了RT-QPCR,以验证AA男性中的顶部差异表达基因。我们发现KLF6,DUSP2,RBM34和CD19在贫困中的AA雄性的显着较低水平下表达,与贫困对照相比,KCTD12更高。本研究用作额外的联系,以更好地了解贫困人中的外周血单核细胞中的基因表达应答。

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