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Big data, medicines safety and pharmacovigilance

机译:大数据,药品安全和药物检修

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Background Since the 1990s, the concept of big data has emerged as more relevant, diverse and larger data sets, responsible for the introduction of new drug developments, improved clinical practices and healthcare financing in the healthcare industry [ 1 ]. For big data analysis, one can handle a large pool of digital medical records or administrative data including drug safety reports, drug prescriptions as well as hospital discharge datasets [ 2 ]. Many rare adverse effects remain undetected due to a limited number of sampled individuals in a clinical trial; hence, it is necessary to monitor the drugs even after their release into the market. In this context, “pharmacovigilance” helps to collect, analyze, and disseminate adverse drug reaction reports collected during the post-marketing phase [ 3 , 4 ]. Data mining from drug safety report databases and medical literature is a time-consuming task; however, with the digital revolution, the researchers are exploring if the potential of big data could be used to study and monitor drug safety. In many developed countries, drug safety surveillance based on databases through automation is becoming increasingly common [ 2 ]. This involves the usage of electronic methods to systematically analyze the large volume of information. This could be further helpful to detect data patterns to identify new adverse drug reactions, which are otherwise not available through normal screening [ 2 ]. This commentary discusses big data, artificial intelligence and the use of social media. It also elaborates, how “big data” feeds into evaluating the safety of new and orphan medicines (Fig.? 1 ). Fig. 1 A framework showing the possible linkages between big data and pharmacovigilance Full size image Artificial intelligence and pharmacovigilance To better understand the use of artificial intelligence in pharmacovigilance, it may be useful to define this in terms of methods, tasks and data sets [ 5 ]. Machine learning is part of artificial intelligence that deals with the ability of machines to learn without having human input. Due to improved computational techniques and the availability of larger datasets, there is an increasing trend in machine learning adoption in healthcare [ 6 ]. For an automated signal generation in pharmacovigilance, both supervised and unsupervised machine learning approaches are used. The unsupervised machine learning approach employs the identification of drug safety signals as well as explores the pattern of drug utilization. While in supervised machine learning, the computer is provided with a set of instructions to produce an algorithm based on the desired output [ 7 ]. It could be explained by considering the identification of an ADR from free text [ 8 ]. This is done by creating an identification pattern extracting information from the medical records and then applying the algorithms to the full electronic medication records. The process is called natural language processing (NLP). It can be applied to identify drug interactions from clinical notes and to find the association between drugs and potential ADRs [ 9 ]. Social media With the increasing use of social media, it is becoming a very useful tool to promote pharmacovigilance. However, several regulatory and technical challenges need to be addressed before the true potential of social media could be explored. The data can be collected from either Twitter or Facebook where several patients share their personal experiences regarding a particular drug or therapy, thus providing a good source for early signal detection [ 10 ]. However, the challenge is the accuracy of the information being posted on these websites. Several methods are in place to cross-check the reliability of data. One such tool is to adapt "Fuzzy Formal Concept Analysis" as it verifies the data by checking the information with the official information sources [ 11 ]. Social media could be very useful particularly in low- and middle-income (LMICs) countries where it is difficult to obtain accurate electronic data and large populations have started using Twitter and Facebook. Orphan drugs In the past, the treatment for rare diseases was a challenge. There was little interest to develop new medicines for these diseases due to little market incentives. To overcome this problem, in the United States, several initiatives were taken including the United States drug act of 1983, the Rare Diseases Act of 2002, the Precision Medicine Initiative, and the 2016 Orphan Products Natural History Grants Program. As a result, the number of orphan medicines increased, and by 2016, 3735 products were registered as orphan drugs in the US. Also, 1314 medicines were registered in Europe [ 12 ]. The number of people who are using orphan drugs is very small, hence conducting pharmacovigilance is a challenge. However, to solve these issues, in some countries, patient support programs (PSPs) are established. The purpose is to create awareness about orphan dise
机译:背景以来,自20世纪90年代以来,大数据的概念已经成为更相关,多样化和更大的数据集,负责引入新的药物发展,改善医疗保健行业的临床实践和医疗保健融资[1]。对于大数据分析,可以处理大量的数字医疗记录或管理数据,包括药物安全报告,药物处方以及医院放电数据集[2]。由于临床试验中有限的采样个体,由于有限数量的采样个体,许多罕见的不良反应仍然未被发现;因此,即使在释放到市场之后,也必须监测药物。在这种情况下,“药物检测”有助于收集,分析和散发在营销后阶段收集的不良药物反应报告[3,4]。药物安全报告数据库和医学文献的数据挖掘是一项耗时的任务;然而,随着数字革命,研究人员正在探索大数据的潜力来研究和监测药物安全。在许多发达国家,通过自动化基于数据库的药物安全监督变得越来越普遍[2]。这涉及使用电子方法来系统地分析大量信息。这可能进一步有助于检测数据模式以识别新的不良药物反应,否则通过正常筛选否则无法获得[2]。这项评论讨论了大数据,人工智能和社交媒体的使用。它还详细阐述,如何为新的和孤儿药物的安全性如何进入(图3)。图1是框架,显示大数据和药物知识的全尺寸图像人工智能和药物文化之间的可能联系,以更好地了解在药所中的使用人工智能,在方法,任务和数据集中定义这一点可能是有用的[5 ]。机器学习是人工智能的一部分,涉及机器在没有人体投入的情况下学习的能力。由于改进的计算技术和较大数据集的可用性,在医疗保健中采用的机器学习采用越来越大的趋势[6]。对于药物检测中的自动信号产生,使用监督和无监督的机器学习方法。无监督的机器学习方法采用药物安全信号的鉴定以及探索药物利用模式。虽然在监督机器学习中,计算机设置有一组指令,用于基于所需输出来产生算法[7]。可以通过考虑从自由文本[8]的识别ADR来解释它。这是通过创建从医学记录中提取信息的识别模式,然后将算法应用于全电子药物记录来完成的。该过程称为自然语言处理(NLP)。它可以应用于鉴定来自临床注意的药物相互作用,并找到药物和潜在ADR之间的关联[9]。社交媒体随着社交媒体的利用而越来越多,它正在成为推广药物知识的一个非常有用的工具。但是,在可以探索社交媒体的真正潜力之前需要解决若干监管和技术挑战。可以从推特或Facebook收集数据,其中几个患者分享他们对特定药物或治疗的个人经验,从而为早期信号检测提供了良好的来源[10]。但是,挑战是在这些网站上发布的信息的准确性。有几种方法是在进行交叉检查数据的可靠性。一个这样的工具是通过用官方信息源检查信息来适应“模糊正式概念分析”,因为它通过官方信息源[11]来验证数据。社交媒体可能非常有用,特别是在低收入和中等收入(LMIC)国家,难以获得准确的电子数据和大型人群使用推特和Facebook。孤儿药在过去,罕见疾病的治疗是一项挑战。由于较少的市场激励措施,对这些疾病开发新药几乎没有兴趣。为了克服这一问题,在美国,采取了几项举措,包括1983年的美国毒品法,2002年稀有疾病法案,精密医学倡议,以及2016年孤儿产品自然历史拨款计划。结果,孤儿药的数量增加,到2016年,3735种产品在美国注册为孤儿药物。此外,1314种药物在欧洲注册[12]。使用孤儿药物的人数很小,因此进行药物检修是一项挑战。但是,为了解决这些问题,在一些国家,建立患者支持计划(PSP)。目的是创造对孤儿丧偶的认识

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