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Insight into structural properties of polyethylene glycol monolaurate in water and alcohols from molecular dynamics studies

机译:分子动力学研究中水和醇中聚乙二醇单聚酸盐的结构性质的洞察

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By means of molecular dynamics (MD) simulations, we explored the structural properties of polyethylene glycol monolaurate (PEGML) in water and in various aliphatic alcohols (methanol, ethanol, 2-propanol, 2-butanol, tert -butanol, and 1-pentanol). The PEGML and the alcohols were simulated using the optimized potentials for liquid simulations, all-atom (OPLS-AA) force field and water using the extended simple point charge (SPC/E) model. From the isothermal-isobaric ( NPT , constant number of particles, constant pressure, and constant temperature) ensemble, we extracted the densities from the simulations and compared them with those from experimental results in order to confirm the validity of the selected force fields. The densities from MD simulations are in good agreement with the experimental values. To gain more insight into the nature of interactions between the PEGML and the solvent molecules, we analyzed the hydrogen-bonds, the electrostatic (Coulomb) interactions, and the van der Waals (Lennard-Jones) interaction energies extracted from MD simulations. The results were further strengthened by computing the solvation free energy by employing the free energy perturbation (FEP) approach. In this method, the free energy difference was computed by using the Bennet Acceptance Ratio (BAR) method. Moreover, the radial distribution functions were analyzed in order to gain more understanding of the solution behavior at the molecular level.
机译:通过分子动力学(MD)模拟,我们探讨了水中的聚乙二醇单磺酸盐(PEGML)的结构性质和各种脂族醇(甲醇,乙醇,2-丙醇,2-丁醇,叔丁醇和1-戊醇)。使用液体模拟的优化电位,使用扩展的简单点电荷(SPC / E)模型来模拟PEGML和醇。从等温性同学(NPT,恒定数量的颗粒,恒定压力和恒定温度)集成,我们从模拟中提取了密度,并将它们与实验结果的那些进行了比较,以确认所选力场的有效性。 MD模拟的密度与实验值吻合良好。为了获得更多地洞察PEGML和溶剂分子之间的相互作用性质,我们分析了从MD模拟中提取的氢键,静电(库仑)相互作用和范德瓦尔斯(Lennard-Jones)交互能量。通过使用自由能扰动(FEP)方法来计算溶剂化自由能进一步加强结果。在该方法中,通过使用本网网络接收比(BAR)方法来计算自由能差。此外,分析了径向分布函数,以便更多地了解分子水平的溶液行为。

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