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Mitochondrial dysfunction and endoplasmic reticulum stress involved in oocyte aging: an analysis using single-cell RNA-sequencing of mouse oocytes

机译:卵母细胞老化中涉及的线粒体功能障碍和内质网胁迫:使用小鼠卵母细胞的单细胞RNA测序分析

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To explore the mechanisms of ovarian aging, we performed overall analysis on the age-related alterations of gene expression profiles in mouse germinal vesicle (GV) stage oocytes by means of single-cell RNA-sequencing method (scRNA-seq). Two age groups (5-week-old and 32-week-old) female KM mice were used as young and old models. Subsequently, GV oocytes were collected for scRNA-seq. The bioinformatics was performed to analyze and compare the differences of gene expression profile between GV oocytes of young and old mice. The analysis of scRNA-seq data showed that there were 624 differential expressed genes (DEGs) between two age groups of mouse GV stage oocytes. Four hundred forty-nine DEGs were up-regulated while 175 DEGs were down-regulated in the GV oocytes of the old group. KEGG pathway analysis revealed that the genes involved in mitochondrial function including oxidative phosphorylation and ATP production pathway were significantly down-regulated in GV oocytes of 32-week-old mice, especially the mitochondrial encoded NADH dehydrogenase (mt-Nd), including mt-Nd2, mt-Nd3, mt-Nd4, mt-Nd4L and mt-Nd5. Analysis of DEGs revealed that endoplasmic reticulum stress-related genes including AdipoR2, IRAK-1, RCAN1 and MsrB1 were significantly down-regulated in GV oocytes of 32-week-old mice. Also, analysis of DEGs demonstrated that anti-oxidation-related genes including Erbb3、Rcan1、Gsto2 and Msrb1 were significantly down-regulated in GV oocytes of old group. The disorder of mitochondrial function, endoplasmic reticulum stress and the reduced antioxidant capability might be involved in the progression of oocyte aging. Especially, the down regulation of mitochondrial encoded subunits of respiratory chain complexes might play critical roles in the relevant mechanisms.
机译:为了探讨卵巢老化的机制,我们通过单细胞RNA测序方法(ScRNA-SEQ)对小鼠生发囊泡(GV)阶段卵母细胞基因表达谱的年龄相关改变的总体分析。两个年龄组(5周龄和32周龄)女km小鼠用作年轻和旧模型。随后,收集GV卵母细胞用于ScrNA-SEQ。进行生物信息学,进行分析,并比较青少年小鼠GV卵母细胞之间基因表达谱的差异。 SCRNA-SEQ数据的分析表明,两龄龄小鼠GV阶段卵母细胞中有624个差异表达基因(DEGS)。上调四百四十九次,而在旧组的GV卵卵细胞下降175次下降。 Kegg途径分析表明,参与电池磷酸化和ATP生产途径的线粒体功能的基因在32周龄小鼠的GV卵ytes中显着下调,特别是线粒体编码的NADH脱氢酶(MT-ND),包括MT-ND2 ,MT-ND3,MT-ND4,MT-ND4L和MT-ND5。对Degs的分析显示,包括Adipor2,Irak-1,RCAn1和MSRB1在内的内质网胁迫相关基因在32周龄小鼠的GV卵ytes中显着下调。此外,对DEG的分析证明,在旧组的GV卵母细胞中显着下调了包括ERBB3,RCAN1,GSTO2和MSRB1的抗氧化相关基因。线粒体功能,内质网应激和降低的抗氧化剂能力的疾病可能参与卵母细胞衰老的进展。特别地,呼吸链复合物的线粒体编码亚基的下调可能在相关机制中起重要作用。

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