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首页> 外文期刊>Scientific reports. >The N-terminal zinc finger domain of Tgf2 transposase contributes to DNA binding and to transposition activity
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The N-terminal zinc finger domain of Tgf2 transposase contributes to DNA binding and to transposition activity

机译:TGF2转座酶的N-末端锌指结构域有助于DNA结合和转子活性

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Active Hobo/Activator/Tam3 (hAT) transposable elements are rarely found in vertebrates. Previously, goldfish Tgf2 was found to be an autonomously active vertebrate transposon that is efficient at gene-transfer in teleost fish. However, little is known about Tgf2 functional domains required for transposition. To explore this, we first predicted in silico a zinc finger domain in the N-terminus of full length Tgf2 transposase (L-Tgf2TPase). Two truncated recombinant Tgf2 transposases with deletions in the N-terminal zinc finger domain, S1- and S2-Tgf2TPase, were expressed in bacteria from goldfish cDNAs. Both truncated Tgf2TPases lost their DNA-binding ability in vitro, specifically at the ends of Tgf2 transposon than native L-Tgf2TPase. Consequently, S1- and S2-Tgf2TPases mediated gene transfer in the zebrafish genome in vivo at a significantly (p??0.01) lower efficiency (21%-25%), in comparison with L-Tgf2TPase (56% efficiency). Compared to L-Tgf2TPase, truncated Tgf2TPases catalyzed imprecise excisions with partial deletion of TE ends and/or plasmid backbone insertion/deletion. The gene integration into the zebrafish genome mediated by truncated Tgf2TPases was imperfect, creating incomplete 8-bp target site duplications at the insertion sites. These results indicate that the zinc finger domain in Tgf2 transposase is involved in binding to Tgf2 terminal sequences, and loss of those domains has effects on TE transposition.
机译:活跃的HOBO / Activator / Tam3(帽子)转换元素很少在脊椎动物中发现。以前,发现金鱼TGF2是一种自主活性的脊椎动物转基因,其在紧邻鱼类中的基因转移中有效。然而,关于换位所需的TGF2功能域几乎是知名的。为了探索这一点,我们首先在全长TGF2转座酶(L-TGF2TPase)的N-末端中的硅锌指结构域中预测。在N-末端锌指结构域,S1-和S2-TGF2TP酶中缺失的两个截短的重组TGF2转座酶在来自金鱼CDNA的细菌中表达。截短的TGF2TPase都在体外失去了它们的DNA结合能力,特别是在TGF2转座子的末端而不是天然L-TGF2TPase。因此,与L-TGF2TPAse(56%效率)相比,S1-和S2-TGF2TP酶以显着的(P≤0.25%)在斑马鱼基因组中介导基因转移。与L-TGF2TPAse相比,截短的TGF2TP酶催化了DE末端和/或质粒骨架插入/缺失的部分缺失的不精确发生。通过截短的TGF2TP酶介导的斑马鱼基因组的基因集成在插入位点处产生不完全的8-BP靶位重复性。这些结果表明,TGF2转座酶中的锌指结构域参与结合TGF2末端序列,并且这些域的损失对TE转座具有影响。

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