首页> 外文期刊>Scientific reports. >Inference of causality in epidemics on temporal contact networks
【24h】

Inference of causality in epidemics on temporal contact networks

机译:时间联系网络上流行病因果关系的推断

获取原文
       

摘要

Investigating into the past history of an epidemic outbreak is a paramount problem in epidemiology. Based on observations about the state of individuals, on the knowledge of the network of contacts and on a mathematical model for the epidemic process, the problem consists in describing some features of the posterior distribution of unobserved past events, such as the source, potential transmissions, and undetected positive cases. Several methods have been proposed for the study of these inference problems on discrete-time, synchronous epidemic models on networks, including naive Bayes, centrality measures, accelerated Monte-Carlo approaches and Belief Propagation. However, most traced real networks consist of short-time contacts on continuous time. A possibility that has been adopted is to discretize time line into identical intervals, a method that becomes more and more precise as the length of the intervals vanishes. Unfortunately, the computational time of the inference methods increase with the number of intervals, turning a sufficiently precise inference procedure often impractical. We show here an extension of the Belief Propagation method that is able to deal with a model of continuous-time events, without resorting to time discretization. We also investigate the effect of time discretization on the quality of the inference.
机译:调查流行病的过去历史是流行病学中的头等大事。基于对个体状态的观察,对联系网络的了解以及对流行过程的数学模型,问题在于描述未观察到的过去事件的后验分布的一些特征,例如来源,潜在传播,以及未发现的阳性病例。已经提出了几种方法来研究网络上离散时间,同步流行病模型上的这些推理问题,包括朴素贝叶斯,中心性测度,加速蒙特卡洛方法和信仰传播。但是,大多数跟踪的真实网络由连续时间的短时间联系组成。已经采用的一种可能性是将时间线离散为相同的间隔,这种方法随着间隔长度的消失而变得越来越精确。不幸的是,推理方法的计算时间随着间隔的数量而增加,因此转向足够精确的推理程序通常是不切实际的。我们在这里展示了“信念传播”方法的扩展,该方法能够处理连续时间事件的模型,而无需求助于时间离散化。我们还研究了时间离散化对推理质量的影响。

著录项

相似文献

  • 外文文献
  • 中文文献
  • 专利
获取原文

客服邮箱:kefu@zhangqiaokeyan.com

京公网安备:11010802029741号 ICP备案号:京ICP备15016152号-6 六维联合信息科技 (北京) 有限公司©版权所有
  • 客服微信

  • 服务号