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Rearrangement of mitochondrial tRNA genes in flat bugs (Hemiptera: Aradidae)

机译:扁平虫中线粒体tRNA基因的重排(半翅目:A虫)

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The typical insect mitochondrial (mt) genome organization, which contains a single chromosome with 37 genes, was found in the infraorder Pentatomomorpha (suborder Heteroptera). The arrangement of mt genes in these true bugs is usually the same as the ancestral mt gene arrangement of insects. Rearrangement of transfer RNA (tRNA) genes, however, has been found in two subfamilies of flat bugs (Mezirinae and Calisiinae, family Aradidae). In this study, we sequenced the complete mt genomes of four species from three other subfamilies (Aradinae, Carventinae and Aneurinae). We found tRNA gene rearrangement in all of these four species. All of the rearranged tRNA genes are located between the mitochondrial control region and cox1, indicating this region as a hotspot for gene rearrangement in flat bugs; the rearrangement is likely caused by events of tandem duplication and random deletion of genes. Furthermore, our phylogenetic and dating analyses indicated that the swap of positions between trnQ and trnI occurred ~162 million years ago (MYA) in the most recent common ancestor of the five subfamilies of flat bugs investigated to date, whereas the swap of positions between trnC and trnW occurred later in the lineage leading to Calisiinae, and the translocation of trnC and trnY occurred later than 134 MYA in the lineage leading to Aradinae.
机译:在常见的昆虫五翅目(亚目异翅目)中发现了典型的昆虫线粒体(mt)基因组组织,其中包含一个具有37个基因的单染色体。这些真虫中mt基因的排列通常与昆虫的祖先mt基因排列相同。但是,在扁平虫的两个亚科(Mezirinae和Calisiinae,Aradidae家族)中发现了转移RNA(tRNA)基因的重排。在这项研究中,我们对来自其他三个亚科(天竺葵,Carventinae和Aneurinae)的四个物种的完整mt基因组进行了测序。我们在所有这四个物种中发现了tRNA基因重排。所有重排的tRNA基因都位于线粒体控制区和cox1之间,表明该区域是扁平虫中基因重排的热点。重排很可能是由基因的串联复制和随机缺失引起的。此外,我们的系统发育和年代分析表明,trnQ和trnI之间的位置交换发生在大约1.62亿年前(MYA),是迄今为止研究的五个扁平虫亚科的最新共同祖先,而trnC之间的位置交换trnW和trnW发生在通向Calisiinae的谱系中,而trnC和trnY的转位发生在134 MYA的通向Aradinae的谱系中。

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