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The complete mitochondrial genome of the flat bug Aradacanthia heissi (Hemiptera: Aradidae)

机译:扁平小虫Aradacanthia heissi(半翅目:Aradidae)的完整线粒体基因组

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The 15528 bp long complete mitochondrial genome (mt-genome) of a flat bug, Aradacanthia heissi Bai, Zhang & Cai, was determined. The entire genome contains typical 37 genes with an A+T content of 74.7%. The gene arrangement differs from that of Drosophila yakuba Burla which is considered the representative ground pattern for insect mt-genomes, as the results of inversion of tRNA~(lle) - tRNA~(Gln) and tRNA~(Cys) - tRNA~(Trp). All protein-coding genes (PCGs) use standard initiation codons (methionineand isoleucine), except COI which starts with TTG. Three of the 13 PCGs harbor the incomplete termination codon. Meanwhile, opposite CG-skew tendency occurs on the nucleotide composition and codon usage and this tendency is also reflected on the J-strandand N-strand of PCGs. All tRNAs can fold into classic clover-leaf structure, whereas the dihydrouridine (DHU) arm of tRNA~(Ser(AGN)) forms a simple loop. Secondary structure models of the ribosomal RNA genes of A. heissi are predicted and similar to those proposed for other insects. The control region is located between srRNA and tRNA~(Gln) with 81.5% A+T content, which was the most A+T-rich region of the mt-genome and four 68 bp tandem repeat units were found in this region. Phylogenetic analyses of available species of Pentatomomorpha showed Ara-doidea and the Trichophora are sister groups that bolstered the mainstream hypothesis, and provide the evidence for the feasibility of mt-genome data to resolve relationships at the subfamily level in Aradidae.
机译:确定了扁平臭虫(Aradacanthia heissi Bai,Zhang&Cai)的15528 bp长的完整线粒体基因组(mt基因组)。整个基因组包含典型的37个基因,A + T含量为74.7%。 tRNA〜(lle)-tRNA〜(Gln)和tRNA〜(Cys)-tRNA〜()的转化结果表明,基因排列不同于果蝇雅库巴布拉(Drosophila yakuba Burla),后者被认为是昆虫mt基因组的代表性接地模式。 Trp)。除以TTG开头的COI以外,所有蛋白质编码基因(PCG)均使用标准起始密码子(蛋氨酸和异亮氨酸)。 13个PCG中有3个带有不完整的终止密码子。同时,在核苷酸组成和密码子使用上出现相反的CG偏斜趋势,并且这种趋势也反映在PCG的J链和N链上。所有的tRNA都可以折叠成经典的三叶草叶结构,而tRNA〜(Ser(AGN))的二氢尿苷(DHU)臂形成一个简单的环。 Heissi的核糖体RNA基因的二级结构模型是可预测的,与针对其他昆虫的拟建模型相似。对照区域位于srRNA和tRNA〜(Gln)之间,具有81.5%的A + T含量,是mt基因组中最富A + T的区域,在该区域发现了四个68 bp的串联重复单元。对五角形目可用物种的系统进化分析表明,Ara-doidea和Trichophora是姐妹群体,这支持了主流假设,并为mt基因组数据解决在亚科中亚家族水平的关系提供了证据。

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