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首页> 外文期刊>Nucleic acids research >Update of MAGEST: Maboya Gene Expression patterns and Sequence Tags
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Update of MAGEST: Maboya Gene Expression patterns and Sequence Tags

机译:MAGEST更新:Maboya基因表达模式和序列标签

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MAGEST is a database for maternal gene expression information for an ascidian, Halocynthia roretzi. The ascidian has become an animal model in developmental biological research because it shows a simple developmental process, and belongs to one of the chordate groups. Various data are deposited into the MAGEST database, e.g. the 3′- and 5′-tag sequences from the fertilized egg cDNA library, the results of similarity searches against GenBank and the expression data from whole mount in situ hybridization. Over the last 2 years, the data retrieval systems have been improved in several aspects, and the tag sequence entries have increased to over 20?000 clones. Additionally, we constructed a database, translated MAGEST, for the amino acid fragment sequences predicted from the EST data sets. Using this information comprehensively, we should obtain new information on gene functions. The MAGEST database is accessible via the Internet at http://www.genome.ad.jp/magest/.
机译:MAGEST是一个用于海生Halocynthia roretzi的母体基因表达信息的数据库。由于该海鞘表现出简单的发育过程,并且已成为其中的一种碳酸盐类,因此它已成为发育生物学研究中的动物模型。各种数据被存入MAGEST数据库,例如来自受精卵cDNA文库的3'-和5'-tag序列,针对GenBank的相似性搜索结果以及来自整装原位杂交的表达数据。在过去的两年中,数据检索系统已在多个方面进行了改进,并且标签序列条目已增加到20 000多个克隆。此外,我们为从EST数据集预测的氨基酸片段序列构建了翻译后的MAGEST数据库。综合利用这些信息,我们应该获得有关基因功能的新信息。 MAGEST数据库可通过Internet访问http://www.genome.ad.jp/magest/。

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